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可编程多价 DNA 折纸张力探针用于报告细胞牵引力。

Programmable Multivalent DNA-Origami Tension Probes for Reporting Cellular Traction Forces.

机构信息

Department of Chemistry , Emory University , 1515 Dickey Drive , Atlanta , Georgia 30322 , United States.

出版信息

Nano Lett. 2018 Aug 8;18(8):4803-4811. doi: 10.1021/acs.nanolett.8b01374. Epub 2018 Jul 5.

Abstract

Mechanical forces are central to most, if not all, biological processes, including cell development, immune recognition, and metastasis. Because the cellular machinery mediating mechano-sensing and force generation is dependent on the nanoscale organization and geometry of protein assemblies, a current need in the field is the development of force-sensing probes that can be customized at the nanometer-length scale. In this work, we describe a DNA origami tension sensor that maps the piconewton (pN) forces generated by living cells. As a proof-of-concept, we engineered a novel library of six-helix-bundle DNA-origami tension probes (DOTPs) with a tailorable number of tension-reporting hairpins (each with their own tunable tension response threshold) and a tunable number of cell-receptor ligands. We used single-molecule force spectroscopy to determine the probes' tension response thresholds and used computational modeling to show that hairpin unfolding is semi-cooperative and orientation-dependent. Finally, we use our DOTP library to map the forces applied by human blood platelets during initial adhesion and activation. We find that the total tension signal exhibited by platelets on DOTP-functionalized surfaces increases with the number of ligands per DOTP, likely due to increased total ligand density, and decreases exponentially with the DOTP's force-response threshold. This work opens the door to applications for understanding and regulating biophysical processes involving cooperativity and multivalency.

摘要

机械力是大多数(如果不是全部)生物过程的核心,包括细胞发育、免疫识别和转移。由于介导机械感知和力产生的细胞机制依赖于蛋白质组装的纳米尺度组织和几何形状,因此该领域目前需要开发可以在纳米长度尺度上定制的力感应探针。在这项工作中,我们描述了一种 DNA 折纸张力传感器,该传感器可以绘制活细胞产生的皮牛顿(pN)力。作为概念验证,我们设计了一种新型六螺旋束 DNA 折纸张力探针(DOTP)文库,该文库具有可定制数量的张力报告发夹(每个发夹都有自己可调的张力响应阈值)和可调数量的细胞受体配体。我们使用单分子力谱技术来确定探针的张力响应阈值,并使用计算模型表明发夹的展开是半协同的,并且与方向有关。最后,我们使用我们的 DOTP 文库来绘制人血小板在初始黏附和激活过程中施加的力。我们发现,在 DOTP 功能化表面上血小板表现出的总张力信号随每个 DOTP 的配体数量增加而增加,这可能是由于总配体密度增加所致,并且随 DOTP 的力响应阈值呈指数下降。这项工作为理解和调节涉及协同作用和多价性的生物物理过程开辟了应用前景。

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Molecular Tension Probes for Imaging Forces at the Cell Surface.用于在细胞表面成像力的分子张力探针。
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