深度学习以 96%的准确率实时定位和识别筛查结肠镜检查中的息肉。

Deep Learning Localizes and Identifies Polyps in Real Time With 96% Accuracy in Screening Colonoscopy.

机构信息

Department of Computer Science, University of California, Irvine, California; Institute for Genomics and Bioinformatics, University of California, Irvine, California.

Department of Medicine, University of California, Irvine, California.

出版信息

Gastroenterology. 2018 Oct;155(4):1069-1078.e8. doi: 10.1053/j.gastro.2018.06.037. Epub 2018 Jun 18.

Abstract

BACKGROUND & AIMS: The benefit of colonoscopy for colorectal cancer prevention depends on the adenoma detection rate (ADR). The ADR should reflect the adenoma prevalence rate, which is estimated to be higher than 50% in the screening-age population. However, the ADR by colonoscopists varies from 7% to 53%. It is estimated that every 1% increase in ADR lowers the risk of interval colorectal cancers by 3%-6%. New strategies are needed to increase the ADR during colonoscopy. We tested the ability of computer-assisted image analysis using convolutional neural networks (CNNs; a deep learning model for image analysis) to improve polyp detection, a surrogate of ADR.

METHODS

We designed and trained deep CNNs to detect polyps using a diverse and representative set of 8,641 hand-labeled images from screening colonoscopies collected from more than 2000 patients. We tested the models on 20 colonoscopy videos with a total duration of 5 hours. Expert colonoscopists were asked to identify all polyps in 9 de-identified colonoscopy videos, which were selected from archived video studies, with or without benefit of the CNN overlay. Their findings were compared with those of the CNN using CNN-assisted expert review as the reference.

RESULTS

When tested on manually labeled images, the CNN identified polyps with an area under the receiver operating characteristic curve of 0.991 and an accuracy of 96.4%. In the analysis of colonoscopy videos in which 28 polyps were removed, 4 expert reviewers identified 8 additional polyps without CNN assistance that had not been removed and identified an additional 17 polyps with CNN assistance (45 in total). All polyps removed and identified by expert review were detected by the CNN. The CNN had a false-positive rate of 7%.

CONCLUSION

In a set of 8,641 colonoscopy images containing 4,088 unique polyps, the CNN identified polyps with a cross-validation accuracy of 96.4% and an area under the receiver operating characteristic curve of 0.991. The CNN system detected and localized polyps well within real-time constraints using an ordinary desktop machine with a contemporary graphics processing unit. This system could increase the ADR and decrease interval colorectal cancers but requires validation in large multicenter trials.

摘要

背景与目的

结肠镜检查预防结直肠癌的益处取决于腺瘤检出率(ADR)。ADR 应反映腺瘤的流行率,据估计,在筛查年龄人群中,这一比率高于 50%。然而,结肠镜检查医生的 ADR 从 7%到 53%不等。据估计,ADR 每增加 1%,结直肠癌的间隔风险就降低 3%-6%。需要新的策略来提高结肠镜检查中的 ADR。我们测试了使用卷积神经网络(CNN;一种用于图像分析的深度学习模型)进行计算机辅助图像分析的能力,以提高息肉检测的能力,这是 ADR 的替代指标。

方法

我们设计并训练了深度 CNN 来使用来自 2000 多名患者的 8641 张不同且具有代表性的筛查结肠镜图像来检测息肉。我们在 20 个总时长为 5 小时的结肠镜视频上测试了这些模型。要求专家结肠镜医生在 9 个匿名结肠镜视频中识别所有息肉,这些视频选自存档的视频研究,有或没有 CNN 叠加层。他们的发现与使用 CNN 辅助专家审查的结果进行了比较,后者作为参考。

结果

在对人工标记图像进行测试时,CNN 确定了曲线下面积为 0.991 的接收器工作特征和准确率为 96.4%的息肉。在分析 28 个息肉被切除的结肠镜视频时,4 位专家审查员在没有 CNN 协助的情况下识别出了 8 个未被切除的额外息肉,并在 CNN 协助下识别出了 17 个额外息肉(共 45 个)。所有由专家审查识别并切除的息肉均被 CNN 检测到。CNN 的假阳性率为 7%。

结论

在一组包含 4088 个独特息肉的 8641 个结肠镜图像中,CNN 在交叉验证中的准确率为 96.4%,接收器工作特征曲线下面积为 0.991。CNN 系统在使用具有现代图形处理单元的普通台式机的实时限制内很好地检测和定位了息肉。该系统可以提高 ADR 并减少结直肠癌的间隔时间,但需要在大型多中心试验中进行验证。

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