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90 种蘑菇的基因组序列。

The Genome Sequences of 90 Mushrooms.

机构信息

Kunming University of Science and Technology, Kunming, 650500, Yunnan, China.

Kunming Edible Fungi Institute of All China Federation of Supply and Marketing Cooperatives, Kunming, 650032, Yunnan, China.

出版信息

Sci Rep. 2018 Jul 2;8(1):9982. doi: 10.1038/s41598-018-28303-2.

Abstract

Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to contain more than 80,000 species in total. We report the draft genome assemblies of macrofungi (83 Basidiomycetes species and 7 Ascomycetes species) based on Illumina sequencing. The genome sizes of these species ranged from 27.4 Mb (Hygrophorus russula) to 202.2 MB (Chroogomphus rutilus). The numbers of protein-coding genes were predicted in the range of 9,511 (Hygrophorus russula) to 52,289 (Craterellus lutescens). This study provides the largest genomic dataset for macrofungi species. This resource will facilitate the artificial cultivation of edible mushrooms and the discovery of novel drug candidates.

摘要

大型真菌被定义为能够生长出可观察到的子实体的真菌。许多物种的子实体通常被称为蘑菇,被世界各地的人们作为食物和/或药物食用。大多数大型真菌属于担子菌门和子囊菌门,据估计,这两个门共有超过 8 万种。我们报告了基于 Illumina 测序的大型真菌(83 种担子菌和 7 种子囊菌)的基因组草图组装。这些物种的基因组大小范围从 27.4 Mb(红汁乳菇)到 202.2 MB(红蜡蘑)。预测的蛋白质编码基因数量范围从 9511 个(红汁乳菇)到 52289 个(黄伞)。本研究为大型真菌物种提供了最大的基因组数据集。该资源将有助于食用菌的人工栽培和新型药物候选物的发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b5a/6028375/7fef35fd2ddb/41598_2018_28303_Fig1_HTML.jpg

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