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本文引用的文献

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Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.单细胞 RNA 测序指导下的单细胞 RNA FISH 稀有细胞检测。
Cell Syst. 2018 Feb 28;6(2):171-179.e5. doi: 10.1016/j.cels.2018.01.014. Epub 2018 Feb 14.
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The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.TREM2-载脂蛋白E通路驱动神经退行性疾病中功能失调的小胶质细胞的转录表型。
Immunity. 2017 Sep 19;47(3):566-581.e9. doi: 10.1016/j.immuni.2017.08.008.
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A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.一种与限制阿尔茨海默病发展相关的独特小胶质细胞类型。
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Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors.单细胞RNA测序揭示了人类血液中新型树突状细胞、单核细胞和祖细胞。
Science. 2017 Apr 21;356(6335). doi: 10.1126/science.aah4573.
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Cell-specific deletion of C1qa identifies microglia as the dominant source of C1q in mouse brain.C1qa的细胞特异性缺失确定小胶质细胞是小鼠大脑中C1q的主要来源。
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Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput.Seq-Well:高通量、便携式、低成本的单细胞 RNA 测序。
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A molecular census of arcuate hypothalamus and median eminence cell types.弓状下丘脑和正中隆起细胞类型的分子普查。
Nat Neurosci. 2017 Mar;20(3):484-496. doi: 10.1038/nn.4495. Epub 2017 Feb 6.
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Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes.健康与2型糖尿病状态下人类胰岛的单细胞转录组分析
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Increased Intrathecal Immune Activation in Virally Suppressed HIV-1 Infected Patients with Neurocognitive Impairment.病毒抑制的HIV-1感染且患有神经认知障碍患者的鞘内免疫激活增加
PLoS One. 2016 Jun 13;11(6):e0157160. doi: 10.1371/journal.pone.0157160. eCollection 2016.
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Macrophages sustain HIV replication in vivo independently of T cells.巨噬细胞在体内可独立于T细胞维持HIV复制。
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单细胞 RNA 测序揭示了病毒抑制的 HIV 期间脑脊液中的类小胶质细胞。

Single-cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid during virologically suppressed HIV.

机构信息

Department of Medicine, Section of Infectious Diseases.

Department of Neurology.

出版信息

JCI Insight. 2018 Sep 20;3(18). doi: 10.1172/jci.insight.121718.

DOI:10.1172/jci.insight.121718
PMID:30232286
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6237230/
Abstract

Central nervous system (CNS) immune activation is an important driver of neuronal injury during several neurodegenerative and neuroinflammatory diseases. During HIV infection, CNS immune activation is associated with high rates of neurocognitive impairment, even during sustained long-term suppressive antiretroviral therapy (ART). However, the cellular subsets that drive immune activation and neuronal damage in the CNS during HIV infection and other neurological conditions remain unknown, in part because CNS cells are difficult to access in living humans. Using single-cell RNA sequencing (scRNA-seq) on cerebrospinal fluid (CSF) and blood from adults with and without HIV, we identified a rare (<5% of cells) subset of myeloid cells that are found only in CSF and that present a gene expression signature that overlaps significantly with neurodegenerative disease-associated microglia. This highlights the power of scRNA-seq of CSF to identify rare CNS immune cell subsets that may perpetuate neuronal injury during HIV infection and other conditions.

摘要

中枢神经系统(CNS)免疫激活是几种神经退行性和神经炎症性疾病中神经元损伤的重要驱动因素。在 HIV 感染期间,CNS 免疫激活与高比例的神经认知障碍相关,即使在持续的长期抑制性抗逆转录病毒治疗(ART)期间也是如此。然而,在 HIV 感染和其他神经疾病期间驱动 CNS 免疫激活和神经元损伤的细胞亚群仍不清楚,部分原因是中枢神经系统细胞在活体人类中难以获取。我们使用来自 HIV 感染者和非感染者的脑脊液(CSF)和血液的单细胞 RNA 测序(scRNA-seq),鉴定了一种罕见的(<5%的细胞)髓样细胞亚群,该亚群仅存在于 CSF 中,其基因表达特征与神经退行性疾病相关的小胶质细胞显著重叠。这突显了 CSF 的 scRNA-seq 用于识别可能在 HIV 感染和其他情况下持续导致神经元损伤的罕见 CNS 免疫细胞亚群的强大功能。