Cameron K R, Stamminger T, Craxton M, Bodemer W, Honess R W, Fleckenstein B
J Virol. 1987 Jul;61(7):2063-70. doi: 10.1128/JVI.61.7.2063-2070.1987.
The sequence of 4.4 kilobase pairs (kbp) from the conventional right terminus of the A + T-rich light-DNA (L-DNA) sequences of the herpesvirus saimiri (HVS) genome contains a leftward-directed open reading frame (ORF) for a 1,299-residue protein. The molecular weight predicted for the protein (143,000) is in good agreement with the estimates of 150,000 to 160,000 for the major nonglycosylated polypeptide of the virion tegument (the 160K polypeptide), previously shown to be encoded by this region of the genome. The first initiation codon of the ORF is only 250 nucleotides from the junction of the L-DNA component with the G + C-rich terminal reiterations (i.e., heavy or H-DNA) of the genome. An unusually A + T-rich sequence (43 of 45 nucleotides are A or T, relative to a mean composition of 40% G + C for the ORF) occurs some 75 bp 5' to this initiation codon, and the first adenylation signal (AATAAA) on this DNA strand occurs 18 bp 3' to the termination codon. The amino acid sequence predicted for the 160K protein of HVS is homologous over most of its length to the 1,318-residue protein encoded by the leftmost major ORF of the G + C-rich genome of Epstein-Barr virus (BNRF1, the 140K nonglycosylated membrane antigen). No homology to either of these proteins is evident among the products predicted from the complete sequence of the alpha herpesvirus varicella-zoster virus. Thus gamma herpesviruses with coding sequences which differ in mean nucleotide composition by some 20% G + C have homologous proteins encoded at similar positions with respect to genome termini, with the right end of HVS being homologous to the left end of Epstein-Barr virus.
赛米利疱疹病毒(HVS)基因组富含A+T的轻链DNA(L-DNA)序列传统右端的4.4千碱基对(kbp)序列包含一个向左的开放阅读框(ORF),编码一个1299个氨基酸残基的蛋白质。预测该蛋白质的分子量(143,000)与病毒体被膜主要非糖基化多肽(160K多肽)的150,000至160,000估计值高度一致,此前已证明该多肽由基因组的这一区域编码。该ORF的第一个起始密码子距离L-DNA组分与基因组富含G+C的末端重复序列(即重链或H-DNA)的连接处仅250个核苷酸。在该起始密码子5'端约75 bp处出现一个异常富含A+T的序列(45个核苷酸中有43个是A或T,相对于该ORF的平均G+C组成为40%),该DNA链上的第一个腺苷酸化信号(AATAAA)出现在终止密码子3'端18 bp处。HVS的160K蛋白预测的氨基酸序列在其大部分长度上与爱泼斯坦-巴尔病毒富含G+C的基因组最左侧主要ORF编码的1318个氨基酸残基的蛋白同源(BNRF1,140K非糖基化膜抗原)。在α疱疹病毒水痘-带状疱疹病毒的完整序列预测的产物中,未发现与这两种蛋白有明显同源性。因此,编码序列平均核苷酸组成相差约20% G+C的γ疱疹病毒在相对于基因组末端的相似位置编码同源蛋白,HVS的右端与爱泼斯坦-巴尔病毒的左端同源。