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The codon preference plot: graphic analysis of protein coding sequences and prediction of gene expression.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):539-49. doi: 10.1093/nar/12.1part2.539.
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New statistical approach to discriminate between protein coding and non-coding regions in DNA sequences and its evaluation.
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Indications that "codon boundaries" are physico-chemically defined and that protein-folding information is contained in the redundant exon bases.
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Key for protein coding sequences identification: computer analysis of codon strategy.
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[Characteristics of the context shift in the frequency of synonymic codons in Escherichia coli].
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Codon preference and primary sequence structure in protein-coding regions.
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Delineation of coding areas in DNA sequences through assignment of codon probabilities.
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Different pattern of codon recognition by mammalian mitochondrial tRNAs.
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Sequence of the nucleoprotein gene from a virulent British field isolate of transmissible gastroenteritis virus and its expression in Saccharomyces cerevisiae.
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The structural code of cyanobacterial genomes.
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Detecting the borders between coding and non-coding DNA regions in prokaryotes based on recursive segmentation and nucleotide doublets statistics.
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Evaluating bacterial gene-finding HMM structures as probabilistic logic programs.
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Misannotations of rRNA can now generate 90% false positive protein matches in metatranscriptomic studies.
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A computer program to search for tRNA genes.
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Some rules in the ordering of nucleotides in the DNA.
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Preferential codon usage in genes.
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Codon catalog usage and the genome hypothesis.
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Method to determine the reading frame of a protein from the purine/pyrimidine genome sequence and its possible evolutionary justification.
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