Zhang Hao, Fang Chunyu, Xie Xinlin, Yang Yicong, Mei Wei, Jin Di, Fei Peng
School of Optical and Electronic Information, Huazhong University of Science and Technology, Wuhan, 430074, China.
equally contributing author.
Biomed Opt Express. 2019 Feb 4;10(3):1044-1063. doi: 10.1364/BOE.10.001044. eCollection 2019 Mar 1.
We combine a generative adversarial network (GAN) with light microscopy to achieve deep learning super-resolution under a large field of view (FOV). By appropriately adopting prior microscopy data in an adversarial training, the neural network can recover a high-resolution, accurate image of new specimen from its single low-resolution measurement. Its capacity has been broadly demonstrated via imaging various types of samples, such as USAF resolution target, human pathological slides, fluorescence-labelled fibroblast cells, and deep tissues in transgenic mouse brain, by both wide-field and light-sheet microscopes. The gigapixel, multi-color reconstruction of these samples verifies a successful GAN-based single image super-resolution procedure. We also propose an image degrading model to generate low resolution images for training, making our approach free from the complex image registration during training data set preparation. After a well-trained network has been created, this deep learning-based imaging approach is capable of recovering a large FOV (~95 mm) enhanced resolution of ~1.7 μm at high speed (within 1 second), while not necessarily introducing any changes to the setup of existing microscopes.
我们将生成对抗网络(GAN)与光学显微镜相结合,以在大视野(FOV)下实现深度学习超分辨率。通过在对抗训练中适当地采用先前的显微镜数据,神经网络可以从其单个低分辨率测量中恢复新标本的高分辨率、准确图像。通过宽场显微镜和光片显微镜对各种类型的样本进行成像,如美国空军分辨率靶标、人类病理切片、荧光标记的成纤维细胞以及转基因小鼠大脑中的深部组织,广泛证明了其能力。这些样本的千兆像素多色重建验证了基于GAN的单图像超分辨率程序的成功。我们还提出了一种图像退化模型来生成用于训练的低分辨率图像,使我们的方法在训练数据集准备过程中无需复杂的图像配准。在创建了经过良好训练的网络之后,这种基于深度学习的成像方法能够在高速(1秒内)恢复大视野(约95毫米)、约1.7微米的增强分辨率,同时不一定对现有显微镜的设置进行任何更改。