Paediatric Clinic, Department of Surgical and Biomedical Sciences, Università degli Studi di Perugia, Piazza Menghini 1, 06129, Perugia, Italy.
Microbiology Unit, Department of Medicine, Università degli Studi di Perugia, Perugia, Italy.
Virol J. 2019 May 15;16(1):64. doi: 10.1186/s12985-019-1173-1.
Acute gastroenteritis (AGE) due to group A rotavirus (RVA) agent is one of the major causes of hospitalization in paediatric age. The G3P[8] RVA genotype has been usually considered as one of the major human genotypes, largely circulating in Asia, but showing low detection rates in the European countries. In recent years, the G3P[8] RVAs emerged also in Europe as a predominant genotype and the viral strains detected revealed high similarities with equine-like G3P[8] RVA strains, resulting in a new variant circulating in humans and able to cause AGE in the paediatric population.
An 8-year-old boy was admitted to the Emergency Room because he had suffered from severe diarrhoea, vomiting, and high fever over the previous two days. Severe dehydration was evident based on low serum concentrations of potassium and sodium, low glycaemia, and pre-renal failure (creatinine 2.48 mg/dL, urea 133 mg/dL). Immunological tests were within normal range. Enzyme immunoassay for the detection of RV was positive, and a sample of faeces was collected in order to perform the molecular characterization of the viral strain. The phylogenetic trees revealed relatedness between the VP7 and VP4 genes of the G3P[8] RVA Italian strain (namely PG2) and those belonging to recent G3P[8] RVAs detected worldwide. The G3 VP7 belonged to the G3-I lineage and shared the highest nucleotide sequence identity (99.8%) with the equine-like G3 previously identified in other countries. The P [8] VP4 revealed a similar clustering pattern to that observed for the VP7. In addition, the molecular characterization of the 11 gene segments of strain PG2 revealed a G3-P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2 genomic constellation.
This case shows the first detection in Italy of a reassortant G3P[8] RVA associated with a severe AGE, which is unusual in a school-age child without any known severe underlying problems. The findings reported in this paper highlight the importance of continuously monitoring the RVA strains circulating in paediatric age in order to detect novel viral variants able to spread in the general population.
轮状病毒 A 组(RVA)引起的急性肠胃炎(AGE)是儿科住院的主要原因之一。G3P[8] RVA 基因型通常被认为是主要的人类基因型之一,主要在亚洲流行,但在欧洲国家的检出率较低。近年来,G3P[8] RVAs 也在欧洲出现,成为主要的基因型,检测到的病毒株与马源样 G3P[8] RVA 株高度相似,导致一种新的变异株在人群中传播,并能引起儿科人群的 AGE。
一名 8 岁男孩因前两天出现严重腹泻、呕吐和高热而被收入急诊室。根据血清钾和钠浓度低、血糖低和肾功能衰竭(肌酐 2.48mg/dL,尿素 133mg/dL),明显存在严重脱水。免疫检查结果在正常范围内。酶联免疫吸附法检测 RV 阳性,并采集粪便样本进行病毒株的分子特征分析。系统进化树显示,意大利 G3P[8] RVA 株(即 PG2)的 VP7 和 VP4 基因与世界范围内最近检测到的 G3P[8] RVAs 具有亲缘关系。G3 VP7 属于 G3-I 谱系,与其他国家先前鉴定的马源样 G3 具有最高核苷酸序列同一性(99.8%)。P[8] VP4 显示出与 VP7 相似的聚类模式。此外,PG2 株的 11 个基因片段的分子特征分析显示 G3-P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2 基因组构成。
本病例首次在意大利发现与严重 AGE 相关的重组 G3P[8] RVA,在无明显严重潜在问题的学龄儿童中较为罕见。本文报道的结果强调了持续监测儿科人群中流行的 RVA 株的重要性,以便发现能够在人群中传播的新型病毒变异株。