• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

影响艰难梭菌菌株电穿孔的因素和条件。

Factors and Conditions That Impact Electroporation of Clostridioides difficile Strains.

机构信息

Department of Biology, Texas A&M University, College Station, Texas, USA.

Department of Biology, Texas A&M University, College Station, Texas, USA

出版信息

mSphere. 2020 Mar 4;5(2):e00941-19. doi: 10.1128/mSphere.00941-19.

DOI:10.1128/mSphere.00941-19
PMID:32132157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7056809/
Abstract

An important risk factor for acquiring infection is antibiotic use. Therefore, a detailed knowledge of the physiology and the virulence factors can help drive the development of new diagnostic tools and nonantibiotic therapeutic agents to combat these organisms. Several genetic systems are available to study in the laboratory environment, and all rely on stably replicating or segregationally unstable plasmids. Currently, the transfer of plasmids into can only be performed by conjugation using or as conjugal donors. Here we report a method to introduce plasmid DNA into using electroporation and test factors that might contribute to higher transformation efficiencies: osmolyte used to stabilize weakened cells, DNA concentration, and recovery time postelectroporation. Depending on the strain and plasmid used, this transformation protocol achieves between 20 and 200 colonies per microgram of DNA and is mostly influenced by the recovery time postelectroporation. Based on our findings, we recommend that each strain be tested for the optimum recovery time in each lab. Understanding the underlying biology of pathogens is essential to develop novel treatment options. To drive this understanding, genetic tools are essential. In recent years, the genetic toolbox available to researchers has expanded significantly but still requires the conjugal transfer of DNA from a donor strain into Here we describe an electroporation-based transformation protocol that was effective at introducing existing genetic tools into different strains.

摘要

获得感染的一个重要危险因素是抗生素的使用。因此,详细了解生理学和毒力因子可以帮助开发新的诊断工具和非抗生素治疗剂来对抗这些生物体。有几种遗传系统可用于实验室环境中的研究,并且都依赖于稳定复制或分离不稳定的质粒。目前,只能通过使用或作为共轭供体的共轭将质粒转入。在这里,我们报告了一种使用电穿孔将质粒 DNA 导入的方法,并测试了可能有助于提高转化效率的因素:用于稳定弱化细胞的渗透剂、DNA 浓度和电穿孔后的恢复时间。根据使用的菌株和质粒,该转化方案每微克 DNA可实现 20 至 200 个菌落,并且主要受电穿孔后的恢复时间影响。基于我们的发现,我们建议每个实验室针对每种菌株测试最佳的恢复时间。了解病原体的基础生物学对于开发新的治疗方法至关重要。为了推动这种理解,遗传工具是必不可少的。近年来,可供研究人员使用的遗传工具包有了显著扩展,但仍需要从供体菌株中将 DNA 共轭转移到。在这里,我们描述了一种基于电穿孔的转化方案,该方案可有效地将现有的遗传工具引入不同的菌株。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/31c9f607367c/mSphere.00941-19-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/d6ba264c9f03/mSphere.00941-19-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/ffa096213360/mSphere.00941-19-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/f7ee55a2507d/mSphere.00941-19-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/0a3a1b309b50/mSphere.00941-19-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/acc9d0c7e891/mSphere.00941-19-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/19958054e512/mSphere.00941-19-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/cf4b371e6942/mSphere.00941-19-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/31c9f607367c/mSphere.00941-19-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/d6ba264c9f03/mSphere.00941-19-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/ffa096213360/mSphere.00941-19-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/f7ee55a2507d/mSphere.00941-19-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/0a3a1b309b50/mSphere.00941-19-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/acc9d0c7e891/mSphere.00941-19-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/19958054e512/mSphere.00941-19-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/cf4b371e6942/mSphere.00941-19-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ee1/7056809/31c9f607367c/mSphere.00941-19-f0008.jpg

相似文献

1
Factors and Conditions That Impact Electroporation of Clostridioides difficile Strains.影响艰难梭菌菌株电穿孔的因素和条件。
mSphere. 2020 Mar 4;5(2):e00941-19. doi: 10.1128/mSphere.00941-19.
2
An survey of extrachromosomal elements   .染色体外元件调查
Microb Genom. 2019 Sep;5(9). doi: 10.1099/mgen.0.000296.
3
Putative Conjugative Plasmids with tcdB and cdtAB Genes in Clostridioides difficile.产 tcdB 和 cdtAB 基因的推定接合质粒在艰难梭菌中。
Emerg Infect Dis. 2020 Sep;26(9):2287-2290. doi: 10.3201/eid2609.191447.
4
Carriage of three plasmids in a single human clinical isolate of Clostridioides difficile.一株艰难梭菌临床分离株中携带三种质粒。
Plasmid. 2023 Jan-Mar;125:102669. doi: 10.1016/j.plasmid.2022.102669. Epub 2022 Dec 23.
5
A Xylose-Inducible Expression System and a CRISPR Interference Plasmid for Targeted Knockdown of Gene Expression in Clostridioides difficile.艰难梭菌中基于木糖诱导表达系统和 CRISPR 干扰质粒的靶向基因表达敲低
J Bacteriol. 2019 Jun 21;201(14). doi: 10.1128/JB.00711-18. Print 2019 Jul 15.
6
Heat shock increases conjugation efficiency in Clostridium difficile.热休克可提高艰难梭菌的接合效率。
Anaerobe. 2016 Dec;42:1-5. doi: 10.1016/j.anaerobe.2016.06.009. Epub 2016 Jul 1.
7
Plasmids of Clostridioides difficile.艰难梭菌的质粒
Curr Opin Microbiol. 2022 Feb;65:87-94. doi: 10.1016/j.mib.2021.10.016. Epub 2021 Nov 11.
8
Improved Method for Transformation of Vibrio vulnificus by Electroporation.电穿孔法改良创伤弧菌转化方法。
Curr Protoc Microbiol. 2020 Sep;58(1):e106. doi: 10.1002/cpmc.106.
9
A Point Mutation in the Transcriptional Repressor PerR Results in a Constitutive Oxidative Stress Response in Clostridioides difficile 630Δ.转录抑制剂 PerR 的一个点突变导致艰难梭菌 630Δ持续的氧化应激反应。
mSphere. 2021 Mar 3;6(2):e00091-21. doi: 10.1128/mSphere.00091-21.
10
Chromosome and Plasmid Features of Two ST37 Strains Isolated in China Reveal Distinct Multidrug Resistance and Virulence Determinants.两株中国分离的 ST37 菌株的染色体和质粒特征揭示了不同的多药耐药性和毒力决定因素。
Microb Drug Resist. 2020 Dec;26(12):1503-1508. doi: 10.1089/mdr.2019.0461. Epub 2020 May 14.

引用本文的文献

1
Phenotypic analysis of various ribotypes reveals consistency among core processes.对各种核糖体分型的表型分析揭示了核心过程之间的一致性。
Appl Environ Microbiol. 2025 Jun 24:e0096425. doi: 10.1128/aem.00964-25.
2
Establishing genetic manipulation for novel strains of human gut bacteria.建立新型人类肠道细菌菌株的基因操作方法。
Microbiome Res Rep. 2023 Jan 3;2(1):1. doi: 10.20517/mrr.2022.13. eCollection 2023.
3
Enhancing 1,3-Propanediol Productivity in the Non-Model Chassis through Genetic Manipulation.通过基因操作提高非模式底盘中1,3 - 丙二醇的产量

本文引用的文献

1
Using an Endogenous CRISPR-Cas System for Genome Editing in the Human Pathogen Clostridium difficile.利用内源性 CRISPR-Cas 系统在人类病原体艰难梭菌中进行基因组编辑。
Appl Environ Microbiol. 2019 Oct 1;85(20). doi: 10.1128/AEM.01416-19. Print 2019 Oct 15.
2
A novel conjugal donor strain for improved DNA transfer into Clostridium spp.一种新型的配偶体供体菌株,可提高 DNA 向梭菌属的转移效率。
Anaerobe. 2019 Oct;59:184-191. doi: 10.1016/j.anaerobe.2019.06.020. Epub 2019 Jun 30.
3
A Xylose-Inducible Expression System and a CRISPR Interference Plasmid for Targeted Knockdown of Gene Expression in Clostridioides difficile.
Microorganisms. 2023 Jul 22;11(7):1855. doi: 10.3390/microorganisms11071855.
4
Tuning of Gene Expression in Using Synthetic Promoters and CRISPRi.利用合成启动子和 CRISPRi 调控 中的基因表达。
ACS Synth Biol. 2022 Dec 16;11(12):4077-4088. doi: 10.1021/acssynbio.2c00385. Epub 2022 Nov 25.
5
Barriers to genetic manipulation of Enterococci: Current Approaches and Future Directions.肠球菌遗传操作的障碍:当前方法和未来方向。
FEMS Microbiol Rev. 2022 Nov 2;46(6). doi: 10.1093/femsre/fuac036.
6
d-Proline Reductase Underlies Proline-Dependent Growth of Clostridioides difficile.d-脯氨酸还原酶是艰难梭菌依赖脯氨酸生长的基础。
J Bacteriol. 2022 Aug 16;204(8):e0022922. doi: 10.1128/jb.00229-22. Epub 2022 Jul 13.
7
Applications of Microwave Energy in Medicine.微波在医学中的应用。
Biosensors (Basel). 2021 Mar 26;11(4):96. doi: 10.3390/bios11040096.
艰难梭菌中基于木糖诱导表达系统和 CRISPR 干扰质粒的靶向基因表达敲低
J Bacteriol. 2019 Jun 21;201(14). doi: 10.1128/JB.00711-18. Print 2019 Jul 15.
4
Conservation of the "Outside-in" Germination Pathway in .“外向内”萌发途径在……中的保守性
Front Microbiol. 2018 Oct 17;9:2487. doi: 10.3389/fmicb.2018.02487. eCollection 2018.
5
Multiplexed CRISPR-Cpf1-Mediated Genome Editing in Clostridium difficile toward the Understanding of Pathogenesis of C. difficile Infection.多重CRISPR-Cpf1介导的艰难梭菌基因组编辑以了解艰难梭菌感染的发病机制
ACS Synth Biol. 2018 Jun 15;7(6):1588-1600. doi: 10.1021/acssynbio.8b00087. Epub 2018 Jun 4.
6
Using CRISPR-Cas9-mediated genome editing to generate C. difficile mutants defective in selenoproteins synthesis.利用 CRISPR-Cas9 介导的基因组编辑技术生成缺乏硒蛋白合成的艰难梭菌突变体。
Sci Rep. 2017 Nov 7;7(1):14672. doi: 10.1038/s41598-017-15236-5.
7
Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 66, part 9, of the IJSEM.关于国际系统与进化微生物学杂志(IJSEM)第66卷第9期出现原核生物新名称、新组合及新分类学观点的通知。
Int J Syst Evol Microbiol. 2016 Dec;66(12):4921-4923. doi: 10.1099/ijsem.0.001620.
8
Development of an efficient electroporation method for rhizobacterial Bacillus mycoides strains.一种针对根际细菌类芽孢杆菌菌株的高效电穿孔方法的开发。
J Microbiol Methods. 2017 Feb;133:82-86. doi: 10.1016/j.mimet.2016.12.022. Epub 2016 Dec 30.
9
Cost of hospital management of Clostridium difficile infection in United States-a meta-analysis and modelling study.美国艰难梭菌感染的医院管理成本——一项荟萃分析与建模研究
BMC Infect Dis. 2016 Aug 25;16(1):447. doi: 10.1186/s12879-016-1786-6.
10
The Miraprep: A Protocol that Uses a Miniprep Kit and Provides Maxiprep Yields.Miraprep:一种使用微量制备试剂盒并能获得大量制备产量的方案。
PLoS One. 2016 Aug 3;11(8):e0160509. doi: 10.1371/journal.pone.0160509. eCollection 2016.