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用于检测多种可能在……中引起绿霉病的……物种的分子标记

Molecular Markers for Detecting a Wide Range of spp. that Might Potentially Cause Green Mold in .

作者信息

Lee Song Hee, Jung Hwa Jin, Hong Seung-Beom, Choi Jong In, Ryu Jae-San

机构信息

Department of Mushroom Science, Korea National College of Agriculture and Fisheries, Jeonju, Korea.

Korean Agricultural Culture Collection, Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Wanju, Korea.

出版信息

Mycobiology. 2020 Jul 7;48(4):313-320. doi: 10.1080/12298093.2020.1785754.

Abstract

In sp., green mold, which is considered a major epidemic, is caused by several species. To develop a rapid molecular marker specific for spp. that potentially cause green mold, eleven species were collected from mushroom farms and the Korean Agricultural Culture Collection (KACC). A dominant fungal isolate from a green mold-infected substrate was identified as based on the sequences of its internal transcribed spacer (ITS) and translation elongation factor 1-α () genes. In artificial inoculation tests, all spp., including , cf. , , , , , , and , showed pathogenicity to some extent, and the observed symptoms were soaked mycelia with a red-brown pigment and retarded mycelium regeneration. A molecular marker was developed for the rapid detection of wide range of spp. based on the DNA sequence alignment of the ITS1 and ITS2 regions of spp. The developed primer set detected only spp., and no cross reactivity with edible mushrooms was observed. The detection limits for the PCR assay of (KACC40558), (KACC44537), and (CAF-TP3) were found to be 500, 50, and 5 fg, respectively, and the detection limit for the pathogen-to-host ratio was approximately 1:10,000 (wt/wt).

摘要

在香菇中,被视为主要病害的绿霉由多种菌种引起。为开发一种针对可能导致绿霉的香菇菌种的快速分子标记,从蘑菇农场和韩国农业文化收藏中心(KACC)收集了11种菌种。根据其内部转录间隔区(ITS)和翻译延伸因子1-α(TEF1-α)基因序列,从感染绿霉的基质中分离出的一种优势真菌菌株被鉴定为[具体菌种]。在人工接种试验中,所有[具体菌种],包括[具体菌种名称列举],在一定程度上都表现出致病性,观察到的症状是菌丝体被红棕色色素浸湿且菌丝体再生受阻。基于香菇菌种ITS1和ITS2区域的DNA序列比对,开发了一种用于快速检测多种香菇菌种的分子标记。所开发的引物组仅能检测到[具体菌种],未观察到与食用蘑菇的交叉反应。发现对[具体菌种名称1](KACC40558)、[具体菌种名称2](KACC44537)和[具体菌种名称3](CAF-TP3)的PCR检测限分别为500、50和5 fg,病原体与宿主的比例检测限约为1:10,000(重量/重量)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/267b/7476530/f410b0d10a01/TMYB_A_1785754_F0001_C.jpg

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