• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过定量建模和合成生物学推进抗菌药物耐药性研究。

Advancing Antimicrobial Resistance Research Through Quantitative Modeling and Synthetic Biology.

作者信息

Farquhar Kevin S, Flohr Harold, Charlebois Daniel A

机构信息

Precision for Medicine, Houston, TX, United States.

Department of Physics, University of Alberta, Edmonton, AB, Canada.

出版信息

Front Bioeng Biotechnol. 2020 Sep 18;8:583415. doi: 10.3389/fbioe.2020.583415. eCollection 2020.

DOI:10.3389/fbioe.2020.583415
PMID:33072732
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7530828/
Abstract

Antimicrobial resistance (AMR) is an emerging global health crisis that is undermining advances in modern medicine and, if unmitigated, threatens to kill 10 million people per year worldwide by 2050. Research over the last decade has demonstrated that the differences between genetically identical cells in the same environment can lead to drug resistance. Fluctuations in gene expression, modulated by gene regulatory networks, can lead to non-genetic heterogeneity that results in the fractional killing of microbial populations causing drug therapies to fail; this non-genetic drug resistance can enhance the probability of acquiring genetic drug resistance mutations. Mathematical models of gene networks can elucidate general principles underlying drug resistance, predict the evolution of resistance, and guide drug resistance experiments in the laboratory. Cells genetically engineered to carry synthetic gene networks regulating drug resistance genes allow for controlled, quantitative experiments on the role of non-genetic heterogeneity in the development of drug resistance. In this perspective article, we emphasize the contributions that mathematical, computational, and synthetic gene network models play in advancing our understanding of AMR to discover effective therapies against drug-resistant infections.

摘要

抗菌药物耐药性(AMR)是一场正在浮现的全球健康危机,正在破坏现代医学的进展,并且如果不加以缓解,到2050年全球每年可能有1000万人因此丧生。过去十年的研究表明,相同环境中基因完全相同的细胞之间的差异会导致耐药性。由基因调控网络调节的基因表达波动会导致非遗传异质性,从而导致微生物群体部分死亡,使药物治疗失败;这种非遗传耐药性会增加获得遗传耐药性突变的可能性。基因网络的数学模型可以阐明耐药性背后的一般原理,预测耐药性的演变,并指导实验室中的耐药性实验。经过基因工程改造以携带调节耐药基因的合成基因网络的细胞,能够针对非遗传异质性在耐药性发展中的作用进行可控的定量实验。在这篇观点文章中,我们强调数学、计算和合成基因网络模型在推动我们对抗菌药物耐药性的理解以发现针对耐药性感染的有效疗法方面所做出的贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d863/7530828/6cd0e65752b4/fbioe-08-583415-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d863/7530828/edc58f713697/fbioe-08-583415-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d863/7530828/6cd0e65752b4/fbioe-08-583415-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d863/7530828/edc58f713697/fbioe-08-583415-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d863/7530828/6cd0e65752b4/fbioe-08-583415-g002.jpg

相似文献

1
Advancing Antimicrobial Resistance Research Through Quantitative Modeling and Synthetic Biology.通过定量建模和合成生物学推进抗菌药物耐药性研究。
Front Bioeng Biotechnol. 2020 Sep 18;8:583415. doi: 10.3389/fbioe.2020.583415. eCollection 2020.
2
Genome-Scale Metabolic Models and Machine Learning Reveal Genetic Determinants of Antibiotic Resistance in Escherichia coli and Unravel the Underlying Metabolic Adaptation Mechanisms.基因组规模代谢模型与机器学习揭示大肠杆菌抗生素耐药性的遗传决定因素并阐明潜在的代谢适应机制。
mSystems. 2021 Aug 31;6(4):e0091320. doi: 10.1128/mSystems.00913-20. Epub 2021 Aug 3.
3
Computational Model To Quantify the Growth of Antibiotic-Resistant Bacteria in Wastewater.用于量化废水中抗生素抗性细菌生长的计算模型
mSystems. 2021 Jun 29;6(3):e0036021. doi: 10.1128/mSystems.00360-21. Epub 2021 Jun 8.
4
Identification of Novel Antimicrobial Resistance Genes Using Machine Learning, Homology Modeling, and Molecular Docking.利用机器学习、同源建模和分子对接鉴定新型抗菌抗性基因
Microorganisms. 2022 Oct 23;10(11):2102. doi: 10.3390/microorganisms10112102.
5
Plant synthetic biology for producing potent phyto-antimicrobials to combat antimicrobial resistance.利用植物合成生物学生产强效植物抗菌素来对抗抗微生物药物耐药性。
Biotechnol Adv. 2021 May-Jun;48:107729. doi: 10.1016/j.biotechadv.2021.107729. Epub 2021 Mar 9.
6
The Neisseria gonorrhoeae Accessory Genome and Its Association with the Core Genome and Antimicrobial Resistance.淋病奈瑟菌附属基因组及其与核心基因组和抗微生物药物耐药性的关联。
Microbiol Spectr. 2022 Jun 29;10(3):e0265421. doi: 10.1128/spectrum.02654-21. Epub 2022 May 23.
7
Using Models to (Re-)Design Synthetic Circuits.利用模型(重新)设计合成电路。
Methods Mol Biol. 2021;2229:91-118. doi: 10.1007/978-1-0716-1032-9_3.
8
Molecular pharmacodynamics of meropenem for nosocomial pneumonia caused by .美罗培南治疗医院获得性肺炎的分子药效动力学。
mBio. 2024 Feb 14;15(2):e0316523. doi: 10.1128/mbio.03165-23. Epub 2024 Jan 18.
9
Population-level mathematical modeling of antimicrobial resistance: a systematic review.人群水平抗菌药物耐药性的数学建模:系统评价。
BMC Med. 2019 Apr 24;17(1):81. doi: 10.1186/s12916-019-1314-9.
10
Elucidating the mechanism of antimicrobial resistance in Mycobacterium tuberculosis using gene interaction networks.利用基因互作网络阐明结核分枝杆菌抗菌药物耐药的机制。
Adv Protein Chem Struct Biol. 2023;134:53-74. doi: 10.1016/bs.apcsb.2022.11.017. Epub 2022 Dec 22.

引用本文的文献

1
Cross-resistance between halquinol and antibiotics of importance in human and animal health.卤喹诺与对人类和动物健康至关重要的抗生素之间的交叉耐药性。
Int Microbiol. 2025 Aug 22. doi: 10.1007/s10123-025-00707-x.
2
Quantitative systems-based prediction of antimicrobial resistance evolution.基于定量系统的抗菌药物耐药性进化预测。
NPJ Syst Biol Appl. 2023 Sep 7;9(1):40. doi: 10.1038/s41540-023-00304-6.
3
Out-of-equilibrium gene expression fluctuations in the presence of extrinsic noise.存在外在噪声时非平衡状态下的基因表达波动。

本文引用的文献

1
Drug resistance and tolerance in fungi.真菌的耐药性和耐受性。
Nat Rev Microbiol. 2020 Jun;18(6):319-331. doi: 10.1038/s41579-019-0322-2. Epub 2020 Feb 11.
2
A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells.一种癌细胞群体中上皮-间充质异质性的机制。
PLoS Comput Biol. 2020 Feb 10;16(2):e1007619. doi: 10.1371/journal.pcbi.1007619. eCollection 2020 Feb.
3
Evolutionary regain of lost gene circuit function.失去的基因回路功能的进化恢复。
Phys Biol. 2023 Aug 10;20(5). doi: 10.1088/1478-3975/acea4e.
4
Identification and Elimination of Antifungal Tolerance in .识别与消除……中的抗真菌耐受性
Biomedicines. 2023 Mar 14;11(3):898. doi: 10.3390/biomedicines11030898.
Proc Natl Acad Sci U S A. 2019 Dec 10;116(50):25162-25171. doi: 10.1073/pnas.1912257116. Epub 2019 Nov 21.
4
A view on drug resistance in cancer.癌症耐药性的观点。
Nature. 2019 Nov;575(7782):299-309. doi: 10.1038/s41586-019-1730-1. Epub 2019 Nov 13.
5
Future Trends in Synthetic Biology-A Report.合成生物学的未来趋势——一份报告
Front Bioeng Biotechnol. 2019 Aug 7;7:175. doi: 10.3389/fbioe.2019.00175. eCollection 2019.
6
Salicylate Increases Fitness Cost Associated with MarA-Mediated Antibiotic Resistance.水杨酸盐增加了 MarA 介导的抗生素耐药性相关的适应代价。
Biophys J. 2019 Aug 6;117(3):563-571. doi: 10.1016/j.bpj.2019.07.005. Epub 2019 Jul 10.
7
Role of network-mediated stochasticity in mammalian drug resistance.网络介导的随机性在哺乳动物药物抵抗中的作用。
Nat Commun. 2019 Jun 24;10(1):2766. doi: 10.1038/s41467-019-10330-w.
8
A Framework for the Modular and Combinatorial Assembly of Synthetic Gene Circuits.一种用于合成基因电路模块化和组合组装的框架。
ACS Synth Biol. 2019 Jul 19;8(7):1691-1697. doi: 10.1021/acssynbio.9b00174. Epub 2019 Jun 24.
9
Modeling cell population dynamics.细胞群体动力学建模。
In Silico Biol. 2019;13(1-2):21-39. doi: 10.3233/ISB-180470.
10
Fungal persister cells: The basis for recalcitrant infections?真菌持久细胞:难治性感染的基础?
PLoS Pathog. 2018 Oct 18;14(10):e1007301. doi: 10.1371/journal.ppat.1007301. eCollection 2018 Oct.