IMG/M 数据管理与分析系统 v.6.0：新增工具和高级功能。
The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities.
机构信息
Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
出版信息
Nucleic Acids Res. 2021 Jan 8;49(D1):D751-D763. doi: 10.1093/nar/gkaa939.
Abstract
The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img.jgi.doe.gov/m/) contains annotated isolate genome and metagenome datasets sequenced at the DOE's Joint Genome Institute (JGI), submitted by external users, or imported from public sources such as NCBI. IMG v 6.0 includes advanced search functions and a new tool for statistical analysis of mixed sets of genomes and metagenome bins. The new IMG web user interface also has a new Help page with additional documentation and webinar tutorials to help users better understand how to use various IMG functions and tools for their research. New datasets have been processed with the prokaryotic annotation pipeline v.5, which includes extended protein family assignments.
摘要
集成微生物基因组与微生物组系统 (IMG/M：https://img.jgi.doe.gov/m/) 包含由 DOE 的联合基因组研究所 (JGI) 测序的、由外部用户提交的或从公共来源（如 NCBI）导入的已注释的分离物基因组和宏基因组数据集。IMG v6.0 包含高级搜索功能和用于混合基因组和宏基因组 bin 的统计分析的新工具。新的 IMG 网络用户界面还具有一个新的帮助页面，其中包含更多文档和网络研讨会教程，以帮助用户更好地了解如何为他们的研究使用各种 IMG 功能和工具。新数据集已使用扩展的蛋白质家族分配的原核注释管道 v.5 进行处理。
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