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一种嗜干性真菌的完整线粒体基因组序列

Complete mitochondrial genome sequence of a xerophilic fungus, .

作者信息

Park Jongsun, Kwon Woochan, Huang Xiaoxiao, Mageswari Anbazhagan, Heo In-Beom, Han Kap-Hoon, Hong Seung-Beom

机构信息

InfoBoss Co., Ltd., Seoul, Republic of Korea.

InfoBoss Research Center, Seoul, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2422-2423. doi: 10.1080/23802359.2019.1586468.

DOI:10.1080/23802359.2019.1586468
PMID:33365569
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687513/
Abstract

is a xerophilic filamentous fungus which can produce various secondary metabolites. Here, we reported the complete mitochondrial genome sequence of isolated from Meju, a soybean brick in Korea. Its mitochondrial genome was successfully assembled from raw reads sequenced using MiSeq by Velvet and SOAPGapCloser. Total length of the mitochondrial genome is 53,882 bp, which is third longest among known mitochondrial genomes and encoded 58 genes (30 protein-coding genes including hypothetical ORFs, two rRNAs, and 26 tRNAs). Nucleotide sequence of coding regions takes over 66.6% and overall GC content is 27.8%. Phylogenetic trees present that is located outside of section . Additional researches will be required for clarifying phylogenetic position of section .

摘要

是一种嗜干性丝状真菌,可产生多种次生代谢产物。在此,我们报道了从韩国大豆砖梅久中分离出的[具体物种名称未给出]的完整线粒体基因组序列。其线粒体基因组通过使用MiSeq测序的原始读数,经Velvet和SOAPGapCloser成功组装。线粒体基因组全长53,882 bp,在已知的[具体物种名称未给出]线粒体基因组中排第三长,编码58个基因(包括假设的开放阅读框在内的30个蛋白质编码基因、两个rRNA和26个tRNA)。编码区的核苷酸序列占比超过66.6%,总体GC含量为27.8%。系统发育树表明[具体物种名称未给出]位于[具体分类单元未给出]组之外。需要进行更多研究以阐明[具体分类单元未给出]组的系统发育位置。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43ba/7687513/28dc89567b46/TMDN_A_1586468_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43ba/7687513/28dc89567b46/TMDN_A_1586468_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43ba/7687513/28dc89567b46/TMDN_A_1586468_F0001_B.jpg

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