Geng Yunfen, Li Yunqing, Zhang Jinfeng, Wang Yi
Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming, People's Republic of China.
Mitochondrial DNA B Resour. 2020 Jan 20;5(1):748-749. doi: 10.1080/23802359.2020.1715297.
The first complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 161,288 bp in length, contains a large single copy region (LSC) of 89,186 bp and a small single copy region (SSC) of 19,354 bp, which were separated by a pair of inverted repeats (IR) regions of 26,370 bp. The genome contains 131 genes, including 86 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.6%, and the corresponding values of the LSC, SSC, and IR regions are 34.1%, 30.8%, and 42.8%, respectively. Further phylogenomic analysis showed that clustered in a unique clade in Caesalpinioideae subfamily.
在本研究中，通过Illumina HiSeq双末端测序数据确定了[物种名称]的首个完整叶绿体基因组（cpDNA）序列。该cpDNA长度为161,288 bp，包含一个89,186 bp的大单拷贝区域（LSC）和一个19,354 bp的小单拷贝区域（SSC），它们被一对26,370 bp的反向重复（IR）区域隔开。该基因组包含131个基因，包括86个蛋白质编码基因、8个核糖体RNA基因和37个转运RNA基因。全基因组的总体GC含量为36.6%，LSC、SSC和IR区域的相应值分别为34.1%、30.8%和42.8%。进一步的系统发育基因组分析表明，[物种名称]聚集在苏木亚科的一个独特分支中。
