Zhang Jinfeng, Li Yunqing, Heng Sokh, Seab Kimsrim, Wang Yi
Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming, Yunnan, People's Republic of China.
Institute of Forest and Wildlife Research and Development Forestry Administration, Phnom, Cambodia.
Mitochondrial DNA B Resour. 2020 Jan 21;5(1):762-763. doi: 10.1080/23802359.2020.1715857.
The first complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 159,115 bp in length, contains a large single-copy region (LSC) of 88,164 bp and a small single-copy region (SSC) of 19,495 bp, which were separated by a pair of inverted repeats (IR) regions of 25,748 bp. The genome contains 128 genes, including 83 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.1%, and the corresponding values of the LSC, SSC, and IR regions are 33.7%, 29.6%, and 42.6%, respectively. Further phylogenomic analysis showed that , and are clustered in a clade in the Detarioideae subfamily.
在本研究中，通过Illumina HiSeq双端测序数据确定了首个完整的叶绿体基因组（cpDNA）序列。该cpDNA长度为159,115 bp，包含一个88,164 bp的大单拷贝区域（LSC）和一个19,495 bp的小单拷贝区域（SSC），它们被一对25,748 bp的反向重复（IR）区域隔开。该基因组包含128个基因，包括83个蛋白质编码基因、8个核糖体RNA基因和37个转运RNA基因。全基因组的总体GC含量为36.1%，LSC、SSC和IR区域的相应值分别为33.7%、29.6%和42.6%。进一步的系统发育基因组分析表明，[具体物种名称]和[具体物种名称]在Detarioideae亚科的一个分支中聚类。
