• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

Ythdf mA 读者功能在斑马鱼发育过程中冗余。

Ythdf mA Readers Function Redundantly during Zebrafish Development.

机构信息

Department of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.

Chey Institute for Advanced Studies, Seoul 06141, Republic of Korea.

出版信息

Cell Rep. 2020 Dec 29;33(13):108598. doi: 10.1016/j.celrep.2020.108598.

DOI:10.1016/j.celrep.2020.108598
PMID:33378672
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11407899/
Abstract

During the maternal-to-zygotic transition (MZT), multiple mechanisms precisely control massive decay of maternal mRNAs. N-methyladenosine (mA) is known to regulate mRNA decay, yet how this modification promotes maternal transcript degradation remains unclear. Here, we find that mA promotes maternal mRNA deadenylation. Yet, genetic loss of mA readers Ythdf2 and Ythdf3 did not impact global maternal mRNA clearance, zygotic genome activation, or the onset of gastrulation, challenging the view that Ythdf2 alone is critical to developmental timing. We reveal that Ythdf proteins function redundantly during zebrafish oogenesis and development, as double Ythdf2 and Ythdf3 deletion prevented female gonad formation and triple Ythdf mutants were lethal. Finally, we show that the microRNA miR-430 functions additively with methylation to promote degradation of common transcript targets. Together these findings reveal that mA facilitates maternal mRNA deadenylation and that multiple pathways and readers act in concert to mediate these effects of methylation on RNA stability.

摘要

在母源到合子的转变(MZT)期间,多种机制精确地控制着母体 mRNA 的大量降解。N6-甲基腺苷(mA)已知可调节 mRNA 降解,但这种修饰如何促进母体转录本的降解尚不清楚。在这里,我们发现 mA 促进母体 mRNA 的去腺苷酸化。然而,mA 读码器 Ythdf2 和 Ythdf3 的遗传缺失并没有影响全局母体 mRNA 的清除、合子基因组激活或原肠胚形成的开始,这对 Ythdf2 单独对发育时间至关重要的观点提出了挑战。我们揭示了 Ythdf 蛋白在斑马鱼卵子发生和发育过程中具有冗余功能,因为双 Ythdf2 和 Ythdf3 缺失阻止了雌性性腺的形成,而三重 Ythdf 突变体是致命的。最后,我们表明 microRNA miR-430 与甲基化一起发挥作用,促进常见转录靶标物的降解。这些发现共同表明,mA 促进母体 mRNA 的去腺苷酸化,并且多个途径和读码器协同作用以介导甲基化对 RNA 稳定性的这些影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/5f8d494612c0/nihms-1658644-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/f93f77f5b29a/nihms-1658644-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/ca04cb0154ce/nihms-1658644-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/821377b91c12/nihms-1658644-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/c45e3091a7a3/nihms-1658644-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/b7df28f257c0/nihms-1658644-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/5f8d494612c0/nihms-1658644-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/f93f77f5b29a/nihms-1658644-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/ca04cb0154ce/nihms-1658644-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/821377b91c12/nihms-1658644-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/c45e3091a7a3/nihms-1658644-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/b7df28f257c0/nihms-1658644-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3821/11407899/5f8d494612c0/nihms-1658644-f0006.jpg

相似文献

1
Ythdf mA Readers Function Redundantly during Zebrafish Development.Ythdf mA 读者功能在斑马鱼发育过程中冗余。
Cell Rep. 2020 Dec 29;33(13):108598. doi: 10.1016/j.celrep.2020.108598.
2
mA-dependent maternal mRNA clearance facilitates zebrafish maternal-to-zygotic transition.依赖毫安的母源mRNA清除促进斑马鱼母源-合子转变。
Nature. 2017 Feb 23;542(7642):475-478. doi: 10.1038/nature21355. Epub 2017 Feb 13.
3
Igf2bp3 maintains maternal RNA stability and ensures early embryo development in zebrafish.Igf2bp3 维持母体 RNA 稳定性并确保斑马鱼早期胚胎发育。
Commun Biol. 2020 Mar 3;3(1):94. doi: 10.1038/s42003-020-0827-2.
4
RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay.RNA 5-甲基胞嘧啶通过防止母体 mRNA 降解促进母源到合子的过渡。
Mol Cell. 2019 Sep 19;75(6):1188-1202.e11. doi: 10.1016/j.molcel.2019.06.033. Epub 2019 Aug 6.
5
Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs.斑马鱼MiR-430促进母源mRNA的去腺苷酸化和清除。
Science. 2006 Apr 7;312(5770):75-9. doi: 10.1126/science.1122689. Epub 2006 Feb 16.
6
The expression of CPEB proteins is sequentially regulated during zebrafish oogenesis and embryogenesis.CPEB蛋白的表达在斑马鱼卵子发生和胚胎发生过程中受到顺序调控。
Mol Reprod Dev. 2014 Apr;81(4):376-87. doi: 10.1002/mrd.22306. Epub 2014 Feb 25.
7
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo.果蝇早期胚胎中通过 piRNA 通路的母体 mRNA 去腺苷酸化和降解。
Nature. 2010 Oct 28;467(7319):1128-32. doi: 10.1038/nature09465. Epub 2010 Oct 17.
8
The maternal-zygotic transition: death and birth of RNAs.母源-合子转变:RNA的消亡与新生
Science. 2007 Apr 20;316(5823):406-7. doi: 10.1126/science.1140693.
9
Dynamics and clinical relevance of maternal mRNA clearance during the oocyte-to-embryo transition in humans.人类卵母细胞到胚胎过渡期间母体 mRNA 清除的动力学和临床相关性。
Nat Commun. 2020 Oct 1;11(1):4917. doi: 10.1038/s41467-020-18680-6.
10
The TATA-binding protein regulates maternal mRNA degradation and differential zygotic transcription in zebrafish.TATA结合蛋白调控斑马鱼母体mRNA降解和合子转录差异。
EMBO J. 2007 Sep 5;26(17):3945-56. doi: 10.1038/sj.emboj.7601821. Epub 2007 Aug 16.

引用本文的文献

1
Crosstalk Between N6-Methyladenosine and Other Epigenetic Mechanisms in Central Nervous System Development and Disorders.N6-甲基腺苷与中枢神经系统发育和疾病中其他表观遗传机制之间的相互作用
Biomolecules. 2025 Jul 28;15(8):1092. doi: 10.3390/biom15081092.
2
H3K4me2 distinguishes a distinct class of enhancers during the maternal-to-zygotic transition.H3K4me2在母源-合子转变过程中区分出一类独特的增强子。
PLoS Biol. 2025 Jul 10;23(7):e3003239. doi: 10.1371/journal.pbio.3003239. eCollection 2025 Jul.
3
Evolutionary Dynamics of Plant TRM6/TRM61 Complexes.

本文引用的文献

1
Context-dependent functional compensation between Ythdf mA reader proteins.Ythdf mA 读者蛋白的功能依赖于上下文的补偿。
Genes Dev. 2020 Oct 1;34(19-20):1373-1391. doi: 10.1101/gad.340695.120. Epub 2020 Sep 17.
2
LabxDB: versatile databases for genomic sequencing and lab management.LabxDB:基因组测序和实验室管理的通用数据库。
Bioinformatics. 2020 Aug 15;36(16):4530-4531. doi: 10.1093/bioinformatics/btaa557.
3
A Unified Model for the Function of YTHDF Proteins in Regulating mA-Modified mRNA.YTHDF 蛋白在调节 mA 修饰 mRNA 功能中的统一模型
植物TRM6/TRM61复合物的进化动力学
Plants (Basel). 2025 Jun 11;14(12):1778. doi: 10.3390/plants14121778.
4
Epigenetic regulation in oogenesis and fetal development: insights into m6A modifications.卵子发生和胎儿发育中的表观遗传调控:对m6A修饰的见解
Front Immunol. 2025 Apr 28;16:1516473. doi: 10.3389/fimmu.2025.1516473. eCollection 2025.
5
Increasingly efficient chromatin binding of cohesin and CTCF supports chromatin architecture formation during zebrafish embryogenesis.在斑马鱼胚胎发生过程中,黏连蛋白和CTCF与染色质的结合效率不断提高,这有助于染色质结构的形成。
Nat Commun. 2025 Feb 21;16(1):1833. doi: 10.1038/s41467-025-56889-5.
6
mA-mRNA Reader YTHDF2 Identified as a Potential Risk Gene in Autism With Disproportionate Megalencephaly.mA-信使核糖核酸阅读器YTHDF2被鉴定为大头畸形比例失调的自闭症潜在风险基因。
Autism Res. 2025 May;18(5):966-982. doi: 10.1002/aur.3314. Epub 2025 Jan 30.
7
N-Methyladenosine Modification on the Function of Female Reproductive Development and Related Diseases.N-甲基腺苷修饰对雌性生殖发育及相关疾病功能的影响
Immun Inflamm Dis. 2024 Dec;12(12):e70089. doi: 10.1002/iid3.70089.
8
Translation of zinc finger domains induces ribosome collision and Znf598-dependent mRNA decay in zebrafish.锌指结构域的翻译诱导斑马鱼核糖体碰撞和锌指蛋白598依赖的mRNA降解。
PLoS Biol. 2024 Dec 5;22(12):e3002887. doi: 10.1371/journal.pbio.3002887. eCollection 2024 Dec.
9
ALBA proteins facilitate cytoplasmic YTHDF-mediated reading of m6A in Arabidopsis.ALBA蛋白促进拟南芥中细胞质YTHDF介导的m6A读取。
EMBO J. 2024 Dec;43(24):6626-6655. doi: 10.1038/s44318-024-00312-0. Epub 2024 Nov 29.
10
The maternal-to-zygotic transition: reprogramming of the cytoplasm and nucleus.母源-合子转变:细胞质与细胞核的重编程
Nat Rev Genet. 2025 Apr;26(4):245-267. doi: 10.1038/s41576-024-00792-0. Epub 2024 Nov 25.
Cell. 2020 Jun 25;181(7):1582-1595.e18. doi: 10.1016/j.cell.2020.05.012. Epub 2020 Jun 2.
4
The Ccr4-Not complex monitors the translating ribosome for codon optimality.Ccr4-Not 复合物监测翻译核糖体上密码子的最优性。
Science. 2020 Apr 17;368(6488). doi: 10.1126/science.aay6912.
5
Reading, writing and erasing mRNA methylation.阅读、书写和擦除 mRNA 甲基化。
Nat Rev Mol Cell Biol. 2019 Oct;20(10):608-624. doi: 10.1038/s41580-019-0168-5. Epub 2019 Sep 13.
6
mA enhances the phase separation potential of mRNA.mA 增强了 mRNA 的相分离潜力。
Nature. 2019 Jul;571(7765):424-428. doi: 10.1038/s41586-019-1374-1. Epub 2019 Jul 10.
7
Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish.在斑马鱼母源到合子的转变过程中,对 3'UTR 序列元件和调节 mRNA 稳定性的蛋白质进行全基因组分析。
Genome Res. 2019 Jul;29(7):1100-1114. doi: 10.1101/gr.245159.118. Epub 2019 Jun 21.
8
The maternal-to-zygotic transition revisited.重新审视母体到合子的过渡。
Development. 2019 Jun 12;146(11):dev161471. doi: 10.1242/dev.161471.
9
Where, When, and How: Context-Dependent Functions of RNA Methylation Writers, Readers, and Erasers.在哪里、何时以及如何:RNA 甲基化写入器、读取器和擦除器的上下文相关功能。
Mol Cell. 2019 May 16;74(4):640-650. doi: 10.1016/j.molcel.2019.04.025.
10
Translation affects mRNA stability in a codon-dependent manner in human cells.翻译以依赖于密码子的方式影响人类细胞中的 mRNA 稳定性。
Elife. 2019 Apr 23;8:e45396. doi: 10.7554/eLife.45396.