Institute of Agricultural Resources and Regional Planning, CAAS, Beijing 100081, PR China.
College of Bioscience and Engineering, Jiangxi Agricultural University, Nanchang 330045, PR China.
Int J Syst Evol Microbiol. 2021 Feb;71(2). doi: 10.1099/ijsem.0.004632.
A Gram-stain-negative, aerobic, motile, short-rod-shaped bacterium with nicosulfuron-degrading ability, designated strain LAM1902, was isolated from a microbial consortium enriched with nicosulfuron as a sole nitrogen and energy source. The optimal temperature and pH for growth of strain LAM1902 were 30 °C and pH 6.0, respectively. Strain LAM1902 could grow in the presence of NaCl with concentration up to 4.0 % (w/v). Comparative analysis of 16S rRNA gene sequences revealed that LAM1902 was closely related to the members of the family to the genus , with the highest similarity to DSM 14399 (99.6 %), WZBFD3-5A2 (99.3 %) and Esp-1 (98.8 %). Multi-locus sequence analysis based on both concatenated sequences of the 16S rRNA gene and three housekeeping genes (, and ) further confirmed the intrageneric phylogenetic position of strain LAM1902. The genomic DNA G+C content of LAM1902 was 64.8 mol%. The low values of DNA-DNA hybridization (less than 43.7 %) and average nucleotide identity (less than 90.9 %) also showed that the strain was distinctly different from known species of the genus . The major fatty acids were C, C cyclo and anteiso C. Ubiquinone Q-9 was detected as the predorminant respiratory quinone. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and aminophospholipid. Based on phylogenetic, phenotypic and chemotaxonomic analyses and genome comparisons, we conclude that strain LAM1902 represents a novel species, for which the name sp. nov. is proposed. The type strain is LAM1902 (=JCM 33860=KCTC 72830).
一株能够降解烟嘧磺隆的革兰氏阴性、需氧、运动、短杆状细菌,被命名为 LAM1902 菌株,从以烟嘧磺隆为唯一氮源和能源的微生物混合培养物中分离得到。LAM1902 菌株的最佳生长温度和 pH 值分别为 30°C 和 pH 6.0。菌株 LAM1902 可以在浓度高达 4.0%(w/v)的 NaCl 存在下生长。16S rRNA 基因序列的比较分析表明,LAM1902 与 家族的成员密切相关,与 DSM 14399(99.6%)、WZBFD3-5A2(99.3%)和 Esp-1(98.8%)最为相似。基于 16S rRNA 基因和三个看家基因( 、 和 )的串联序列的多位点序列分析进一步证实了 LAM1902 菌株的属内系统发育位置。LAM1902 的基因组 DNA G+C 含量为 64.8mol%。较低的 DNA-DNA 杂交值(低于 43.7%)和平均核苷酸同一性值(低于 90.9%)也表明该菌株与该属的已知种明显不同。主要脂肪酸为 C 、 C 环和 anteiso C。检测到的主要呼吸醌为泛醌 Q-9。主要极性脂类为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺和氨基磷脂。基于系统发育、表型和化学分类学分析以及基因组比较,我们得出结论,菌株 LAM1902 代表一个新种,建议将其命名为 sp. nov.。模式菌株为 LAM1902(=JCM 33860=KCTC 72830)。