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体液中的环状 RNA 作为癌症生物标志物:液体活检的新前沿。

Circular RNAs in body fluids as cancer biomarkers: the new frontier of liquid biopsies.

机构信息

Department of Oncology, The First Affiliated Hospital of Nanjing Medical University, 300 Guangzhou Road, Nanjing, 210029, Jiangsu, People's Republic of China.

Department of Environmental Genomics, Jiangsu Key Laboratory of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Centre for Cancer Personalized Medicine, Nanjing Medical University, Nanjing, People's Republic of China.

出版信息

Mol Cancer. 2021 Jan 11;20(1):13. doi: 10.1186/s12943-020-01298-z.

Abstract

Cancer is a leading cause of death worldwide, particularly because of its high mortality rate in patients who are diagnosed at late stages. Conventional biomarkers originating from blood are widely used for cancer diagnosis, but their low sensitivity and specificity limit their widespread application in cancer screening among the general population. Currently, emerging studies are exploiting novel, highly-accurate biomarkers in human body fluids that are obtainable through minimally invasive techniques, which is defined as liquid biopsy. Circular RNAs (circRNAs) are a newly discovered class of noncoding RNAs generated mainly by pre-mRNA splicing. Following the rapid development of high-throughput transcriptome analysis techniques, numerous circRNAs have been recognized to exist stably and at high levels in body fluids, including plasma, serum, exosomes, and urine. CircRNA expression patterns exhibit distinctly differences between patients with cancer and healthy controls, suggesting that circRNAs in body fluids potentially represent novel biomarkers for monitoring cancer development and progression. In this study, we summarized the expression of circRNAs in body fluids in a pan-cancer dataset and characterized their clinical applications in liquid biopsy for cancer diagnosis and prognosis. In addition, a user-friendly web interface was developed to visualize each circRNA in fluids ( https://mulongdu.shinyapps.io/circrnas_in_fluids/ ).

摘要

癌症是全球主要的死亡原因,特别是因为其在晚期诊断的患者中的高死亡率。源于血液的传统生物标志物广泛用于癌症诊断,但它们的低灵敏度和特异性限制了它们在普通人群癌症筛查中的广泛应用。目前,新兴研究正在利用人体液中通过微创技术获得的新型、高度准确的生物标志物,这被定义为液体活检。环状 RNA(circRNA)是一类新发现的非编码 RNA,主要由前体 mRNA 剪接产生。随着高通量转录组分析技术的快速发展,已经发现许多 circRNA 在体液中稳定且高水平存在,包括血浆、血清、外泌体和尿液。癌症患者和健康对照之间的 circRNA 表达模式存在明显差异,这表明体液中的 circRNA 可能代表监测癌症发展和进展的新型生物标志物。在这项研究中,我们总结了泛癌数据集体液中 circRNA 的表达,并描述了它们在液体活检癌症诊断和预后中的临床应用。此外,还开发了一个用户友好的网络界面来可视化体液中的每个 circRNA(https://mulongdu.shinyapps.io/circrnas_in_fluids/)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f40/7798340/4c8d4a30f87b/12943_2020_1298_Fig1_HTML.jpg

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