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普通小麦中的异型等位基因:位点等位基因变异体之间的多个差异。

Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Locus.

机构信息

Department of Biotechnology-Plant Biology, School of Agricultural, Food and Biosystems Engineering, Universidad Politécnica de Madrid, 28040 Madrid, Spain.

Consiglio per la Recerca in Agricultura e l'Analisi dell'Economia Agraria, Research Centre for Cereal and Industrial Crops, 13100 Vercelli, Italy.

出版信息

Int J Mol Sci. 2021 Feb 12;22(4):1832. doi: 10.3390/ijms22041832.

DOI:10.3390/ijms22041832
PMID:33673225
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7917834/
Abstract

The -encoded γ-gliadins and non-coding γ-gliadin DNA sequences for 15 different alleles of common wheat have been compared using seven tests: electrophoretic mobility (EM) and molecular weight (MW) of the encoded major γ-gliadin, restriction fragment length polymorphism patterns (RFLPs) (three different markers), -γ-gliadin-pseudogene known SNP markers (Single nucleotide polymorphisms) and sequencing the pseudogene . It was discovered that encoded γ-gliadins, with contrasting EM, had similar MWs. However, seven allelic variants (designated from I to VII) differed among them in the other six tests: I (alleles , , , ), II (, , ), III (), IV (, , ), V (), VI () and VII (). Allele (variant VIII) was identical to the alleles from group IV in four of the tests. Some tests might show a fine difference between alleles belonging to the same variant. Our results attest in favor of the independent origin of at least seven variants at the locus that might originate from deeply diverged genotypes of the donor(s) of the B genome in hexaploid wheat and therefore might be called "heteroallelic". The donor's particularities at the locus might be conserved since that time and decisively contribute to the current high genetic diversity of common wheat.

摘要

已使用七种测试方法比较了编码 γ-醇溶蛋白和非编码 γ-醇溶蛋白 DNA 序列的 15 个普通小麦不同等位基因:编码主要 γ-醇溶蛋白的电泳迁移率(EM)和分子量(MW)、限制片段长度多态性模式(RFLPs)(三种不同标记物)、已知的 -γ-醇溶蛋白假基因 SNP 标记物(单核苷酸多态性)和假基因测序。结果发现,具有不同 EM 的编码 γ-醇溶蛋白具有相似的 MW。然而,在其他六个测试中,七个等位基因变体(命名为 I 至 VII)有所不同:I(等位基因 、 、 )、II( 、 )、III()、IV( 、 )、V()、VI()和 VII()。等位基因 (变体 VIII)在四个测试中与 IV 组的等位基因相同。一些测试可能会显示出属于同一变体的等位基因之间的细微差异。我们的结果支持至少七个变体在 位点的独立起源,这些变体可能源自六倍体小麦 B 基因组供体(s)的深度分化基因型,因此可以称为“异等位基因”。自那时以来, 位点的供体的特殊性可能得以保留,并为普通小麦目前的高度遗传多样性做出决定性贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/c3922adbdac9/ijms-22-01832-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/aa2217ae0d20/ijms-22-01832-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/3e0b09c3e4d0/ijms-22-01832-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/f3224b0ea929/ijms-22-01832-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/3c02e492059f/ijms-22-01832-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/1ab0335712ec/ijms-22-01832-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/c3922adbdac9/ijms-22-01832-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/aa2217ae0d20/ijms-22-01832-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/3e0b09c3e4d0/ijms-22-01832-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/f3224b0ea929/ijms-22-01832-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/3c02e492059f/ijms-22-01832-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/1ab0335712ec/ijms-22-01832-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f3f/7917834/c3922adbdac9/ijms-22-01832-g006.jpg

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