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基于脑电图的脑网络应用中多层社区检测算法的综合分析

A Comprehensive Analysis of Multilayer Community Detection Algorithms for Application to EEG-Based Brain Networks.

作者信息

Puxeddu Maria Grazia, Petti Manuela, Astolfi Laura

机构信息

Department of Computer, Control and Management Engineering "Antonio Ruberti", University of Rome Sapienza, Rome, Italy.

IRCCS Fondazione Santa Lucia, Rome, Italy.

出版信息

Front Syst Neurosci. 2021 Mar 1;15:624183. doi: 10.3389/fnsys.2021.624183. eCollection 2021.

Abstract

Modular organization is an emergent property of brain networks, responsible for shaping communication processes and underpinning brain functioning. Moreover, brain networks are intrinsically multilayer since their attributes can vary across time, subjects, frequency, or other domains. Identifying the modular structure in multilayer brain networks represents a gateway toward a deeper understanding of neural processes underlying cognition. Electroencephalographic (EEG) signals, thanks to their high temporal resolution, can give rise to multilayer networks able to follow the dynamics of brain activity. Despite this potential, the community organization has not yet been thoroughly investigated in brain networks estimated from EEG. Furthermore, at the state of the art, there is still no agreement about which algorithm is the most suitable to detect communities in multilayer brain networks, and a way to test and compare them all under a variety of conditions is lacking. In this work, we perform a comprehensive analysis of three algorithms at the state of the art for multilayer community detection (namely, genLouvain, DynMoga, and FacetNet) as compared with an approach based on the application of a single-layer clustering algorithm to each slice of the multilayer network. We test their ability to identify both steady and dynamic modular structures. We statistically evaluate their performances by means of benchmark graphs characterized by properties covering a broad range of conditions in terms of graph density, number of clusters, noise level, and number of layers. The results of this simulation study aim to provide guidelines about the choice of the more appropriate algorithm according to the different properties of the brain network under examination. Finally, as a proof of concept, we show an application of the algorithms to real functional brain networks derived from EEG signals collected at rest with closed and open eyes. The test on real data provided results in agreement with the conclusions of the simulation study and confirmed the feasibility of multilayer analysis of EEG-based brain networks in both steady and dynamic conditions.

摘要

模块化组织是脑网络的一种涌现属性,负责塑造通信过程并支撑大脑功能。此外,脑网络本质上是多层的,因为其属性会随时间、个体、频率或其他维度而变化。识别多层脑网络中的模块化结构是深入理解认知背后神经过程的关键途径。脑电图(EEG)信号由于其高时间分辨率,能够产生能够追踪大脑活动动态的多层网络。尽管有这种潜力,但尚未对从EEG估计的脑网络中的群落组织进行深入研究。此外,在当前技术水平下,对于哪种算法最适合检测多层脑网络中的群落仍未达成共识,并且缺乏在各种条件下对所有算法进行测试和比较的方法。在这项工作中,我们对当前技术水平下用于多层群落检测的三种算法(即genLouvain、DynMoga和FacetNet)进行了全面分析,并与一种基于将单层聚类算法应用于多层网络的每个切片的方法进行了比较。我们测试了它们识别稳定和动态模块化结构的能力。我们通过具有覆盖广泛条件的属性的基准图,从图密度、簇数量、噪声水平和层数等方面对它们的性能进行统计评估。这项模拟研究的结果旨在根据所研究脑网络的不同属性,为选择更合适的算法提供指导。最后,作为概念验证,我们展示了这些算法在从闭眼和睁眼静息状态采集的数据中得出的真实功能性脑网络上的应用。对真实数据的测试结果与模拟研究的结论一致,并证实了在稳定和动态条件下对基于EEG的脑网络进行多层分析的可行性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/105c/7956967/f752125feb7e/fnsys-15-624183-g0001.jpg

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