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O 电子-核双共振光谱法检测核苷酸还原酶自由基转移途径上的水分子。

Detection of Water Molecules on the Radical Transfer Pathway of Ribonucleotide Reductase by O Electron-Nuclear Double Resonance Spectroscopy.

机构信息

Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.

Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 20139, United States.

出版信息

J Am Chem Soc. 2021 May 19;143(19):7237-7241. doi: 10.1021/jacs.1c01359. Epub 2021 May 6.

Abstract

The role of water in biological proton-coupled electron transfer (PCET) is emerging as a key for understanding mechanistic details at atomic resolution. Here we demonstrate O high-frequency electron-nuclear double resonance (ENDOR) in conjunction with HO-labeled protein buffer to establish the presence of ordered water molecules at three radical intermediates in an active enzyme complex, the αβ ribonucleotide reductase. Our data give unambiguous evidence that all three, individually trapped, intermediates are hyperfine coupled to one water molecule with Tyr-O···O distances in the range 2.8-3.1 Å. The availability of this structural information will allow for quantitative models of PCET in this prototype enzyme. The results also provide a spectroscopic signature for water H-bonded to a tyrosyl radical.

摘要

水在生物质子耦合电子转移(PCET)中的作用正成为理解原子分辨率下的机制细节的关键。在这里,我们展示了 O 高频电子-核双共振(ENDOR)与 HO 标记的蛋白质缓冲液相结合,在一个活性酶复合物,即αβ 核糖核苷酸还原酶中,确定了三个自由基中间体处有序水分子的存在。我们的数据提供了明确的证据,证明所有三个单独捕获的中间体都与一个水分子超精细耦合,Tyr-O···O 距离在 2.8-3.1 Å 范围内。该结构信息的可用性将允许对该原型酶中的 PCET 进行定量模型研究。该结果还为与酪氨酸自由基氢键结合的水分子提供了光谱特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f13/8154519/d915aa7bba43/ja1c01359_0003.jpg

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