Institute of Bioanalytical Chemistry, Faculty of Chemistry and Mineralogy, Germany; Center for Biotechnology and Biomedicine, University of Leipzig, Deutscher Platz 5, 04103, Leipzig, Germany.
Department of Structural and Chemical Biology, Centro de Investigaciones Biológicas Margarita Salas, C.S.I.C., 28040, Madrid, Spain.
Redox Biol. 2021 Aug;44:102014. doi: 10.1016/j.redox.2021.102014. Epub 2021 May 24.
The cytoskeleton is a supramolecular structure consisting of interacting protein networks that support cell dynamics in essential processes such as migration and division, as well as in responses to stress. Fast cytoskeletal remodeling is achieved with the participation of regulatory proteins and posttranslational modifications (PTMs). Redox-related PTMs are emerging as critical players in cytoskeletal regulation. Here we used a cellular model of mild nitroxidative stress in which a peroxynitrite donor induced transient changes in the organization of three key cytoskeletal proteins, i.e., vimentin, actin and tubulin. Nitroxidative stress-induced reconfiguration of intermediate filaments, microtubules and actin structures were further correlated with their PTM profiles and dynamics of the PTM landscape. Using high-resolution mass spectrometry, 62 different PTMs were identified and relatively quantified in vimentin, actin and tubulin, including 12 enzymatic, 13 oxidative and 2 nitric oxide-derived modifications as well as 35 modifications by carbonylated lipid peroxidation products, thus evidencing the occurrence of a chain reaction with formation of numerous reactive species and activation of multiple signaling pathways. Our results unveil the presence of certain modifications under basal conditions and their modulation in response to stress in a target-, residue- and reactive species-dependent manner. Thus, some modifications accumulated during the experiment whereas others varied transiently. Moreover, we identified protein PTM "hot spots", such as the single cysteine residue of vimentin, which was detected in seven modified forms, thus, supporting its role in PTM crosstalk and redox sensing. Finally, identification of novel PTMs in these proteins paves the way for unveiling new cytoskeleton regulatory mechanisms.
细胞骨架是一种由相互作用的蛋白质网络组成的超分子结构,支持细胞在迁移和分裂等基本过程以及应对应激时的动态变化。细胞骨架的快速重塑是通过调节蛋白和翻译后修饰(PTMs)的参与来实现的。与氧化还原相关的 PTMs 正在成为细胞骨架调节的关键因素。在这里,我们使用轻度硝氧应激的细胞模型,其中过氧亚硝酸盐供体诱导三种关键细胞骨架蛋白(即波形蛋白、肌动蛋白和微管蛋白)的组织发生短暂变化。硝氧应激诱导的中间丝、微管和肌动蛋白结构的重新配置与它们的 PTM 谱及其 PTM 景观的动态进一步相关。使用高分辨率质谱,在波形蛋白、肌动蛋白和微管蛋白中鉴定和相对定量了 62 种不同的 PTM,包括 12 种酶促、13 种氧化和 2 种一氧化氮衍生修饰以及 35 种由羰基化脂质过氧化产物修饰的修饰,从而证明了反应链的发生以及形成了许多活性物质和激活了多种信号通路。我们的结果表明,在基础条件下存在某些修饰,并且它们以靶标、残基和活性物质依赖的方式在应激反应中被调节。因此,在实验过程中,某些修饰会积累,而另一些修饰会短暂变化。此外,我们确定了蛋白质 PTM 的“热点”,例如波形蛋白的单个半胱氨酸残基,它被检测到存在七种修饰形式,从而支持其在 PTM 串扰和氧化还原感应中的作用。最后,在这些蛋白质中鉴定新的 PTM 为揭示新的细胞骨架调节机制铺平了道路。