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16种泰国本土菊科药用植物的植物化学筛选、抗疟活性及亲缘关系:在抗疟药物发现中运用系统发育学和民族植物学进行生物勘探的组合方法

Phytochemical screening, antimalarial activities, and genetic relationship of 16 indigenous Thai Asteraceae medicinal plants: A combinatorial approach using phylogeny and ethnobotanical bioprospecting in antimalarial drug discovery.

作者信息

Liana Desy, Rungsihirunrat Kanchana

机构信息

Department of Public Health Sciences, College of Public Health Sciences, Chulalongkorn University, Bangkok, Thailand.

出版信息

J Adv Pharm Technol Res. 2021 Jul-Sep;12(3):254-260. doi: 10.4103/japtr.JAPTR_238_21. Epub 2021 Jul 16.

Abstract

Emergence of artemisinin resistance leads the people to discover the new candidate for antimalarial drug. Combinatorial phylogeny and ethnobotanical approach may be useful to minimize the expenditure and time in laboratory testing. Seven hundred and thirty-three ethnomedicinal plants were listed from literature search. Obtained 340 internal transcribed spacer (ITS) sequences of plant list which met criteria were retrieved from GenBank NCBI and analyzed by MUSCLE and maximum likelihood phylogenetic test to generate the phylogenetic tree. Interactive phylogenetic tree was generated by Interactive Tree of Life (ITOL, https://itol.embl.de) and showed strong clustered pattern on Asteraceae. Afterward, 16 species of Asteraceae were selected to investigate the antimalarial activity, phytochemical, and genetic diversity. The presence of phytochemical was determined by standard method. DNA fluorescence-based assay was performed to determine the antimalarial activity against 3D7 . ICμg/mL was used to categorize antimalarial activity. On the other hand, ITS universal primer was used to amplify and sequence the obtained extracted DNA of tested plant by cetyltrimethylammonium bromide method. Phylogenetic analyses were performed by MAFFT and RAxML with automatic bootstrapping. ITOL and Adobe Illustrator were used to generate interactive phylogenetic tree. All species tested showed the presence of phenolics and flavonoids, whereas alkaloids and terpenoids were shown vary among tested extracts. Among 16 species tested, 1 species exhibited good-moderate (, IC6.59 μg/mL), 4 weak ( and ), and 3 very weak ( and ). Generated phylogenetic tree by ITS data was able to separate the tested species into their tribal classification. In addition, new medicinal properties of were discovered. Combining phylogeny approach with ethnobotanical data is useful to narrow down the selection of antimalarial plants candidate.

摘要

青蒿素耐药性的出现促使人们去寻找新的抗疟药物候选物。组合系统发育学和民族植物学方法可能有助于减少实验室测试的费用和时间。通过文献检索列出了733种民族药用植物。从GenBank NCBI中检索到符合标准的植物列表中的340个内部转录间隔区(ITS)序列,并通过MUSCLE和最大似然系统发育测试进行分析以生成系统发育树。交互式系统发育树由交互式生命树(ITOL,https://itol.embl.de)生成,显示在菊科上有很强的聚类模式。随后,选择了16种菊科植物来研究其抗疟活性、植物化学和遗传多样性。通过标准方法确定植物化学物质的存在。进行基于DNA荧光的测定以确定对3D7的抗疟活性。ICμg/mL用于对抗疟活性进行分类。另一方面,使用ITS通用引物通过十六烷基三甲基溴化铵法对测试植物提取的DNA进行扩增和测序。通过MAFFT和RAxML进行自动自展的系统发育分析。使用ITOL和Adobe Illustrator生成交互式系统发育树。所有测试物种均显示存在酚类和黄酮类化合物,而生物碱和萜类化合物在测试提取物中各不相同。在16种测试物种中,1种表现出良好至中等(IC6.59μg/mL),4种较弱(和),3种非常弱(和)。通过ITS数据生成的系统发育树能够将测试物种按其部落分类分开。此外,还发现了的新药用特性。将系统发育方法与民族植物学数据相结合有助于缩小抗疟植物候选物的选择范围。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1880/8300331/bd7539bc23f0/JAPTR-12-254-g001.jpg

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