Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Biomass Energy Center for Arid and Semi-Arid Lands, College of Life Sciences, Northwest A & F University, Yangling, Xianyang 712100, China.
Ministry of Agriculture Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, College of Natural Resources and Environment, Northwest A & F University, Yangling, Xianyang 712100, China.
Molecules. 2021 Sep 11;26(18):5521. doi: 10.3390/molecules26185521.
The extracellular polysaccharide (EPS) matrix embedding microbial cells and soil particles plays an important role in the development of biological soil crusts (BSCs), which is widely recognized as beneficial to soil fertility in dryland worldwide. This study examined the EPS-producing bacterial strains YL24-1 and YL24-3 isolated from sandy soil in the Mu Us Desert in Yulin, Shaanxi province, China. The strains YL24-1 and YL24-3 were able to efficiently produce EPS; the levels of EPS were determined to be 257.22 μg/mL and 83.41 μg/mL in cultures grown for 72 h and were identified as and sp., respectively. When the strain YL24-3 was compared to YL28-9 using 16S rRNA gene sequencing, the resemblance was 98.6% and the strain was classified as sp. using physiological and biochemical analysis. Furthermore, strain YL24-3 was also identified as a subspecies of YL28-9 on the basis of DNA-DNA hybridization and polar lipid analysis compared with YL28-9. On the basis of the EPS-related genes of relevant strains in the GenBank, several EPS-related genes were cloned and sequenced in the strain YL24-1, including those potentially involved in EPS synthesis, assembly, transport, and secretion. Given the differences of the strains in EPS production, it is possible that the differences in gene sequences result in variations in the enzyme/protein activities for EPS biosynthesis, assembly, transport, and secretion. The results provide preliminary evidence of various contributions of bacterial strains to the formation of EPS matrix in the Mu Us Desert.
从陕西省榆林市毛乌素沙漠沙中分离到两株产胞外多糖(EPS)的细菌YL24-1 和 YL24-3,其最适产EPS 条件为:30℃、pH7.0、转速 180r/min,培养 72h 后 EPS 产量分别为 257.22μg/mL 和 83.41μg/mL。对菌株 YL24-3 进行了 16S rRNA 基因序列分析、生理生化特性分析和 DNA-DNA 杂交分析,结果表明菌株 YL24-3 与 YL28-9 的相似性为 98.6%,分类地位为 sp.;通过对菌株 YL24-3 的 EPS 相关基因克隆测序,并与 GenBank 中相关菌株的 EPS 基因序列进行同源性比对分析,发现其 EPS 生物合成、组装、转运和分泌相关基因存在差异。推测这些差异可能导致 EPS 生物合成、组装、转运和分泌相关酶/蛋白活性的不同,从而影响 EPS 的产量。该研究为阐明毛乌素沙漠生物结皮中 EPS 基质的形成机制提供了理论依据。