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Automated diagnosis of COVID-19 with limited posteroanterior chest X-ray images using fine-tuned deep neural networks.

作者信息

Punn Narinder Singh, Agarwal Sonali

机构信息

IIIT Allahabad, Prayagraj, 211015 India.

出版信息

Appl Intell (Dordr). 2021;51(5):2689-2702. doi: 10.1007/s10489-020-01900-3. Epub 2020 Oct 17.


DOI:10.1007/s10489-020-01900-3
PMID:34764554
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7568031/
Abstract

The novel coronavirus 2019 (COVID-19) is a respiratory syndrome that resembles pneumonia. The current diagnostic procedure of COVID-19 follows reverse-transcriptase polymerase chain reaction (RT-PCR) based approach which however is less sensitive to identify the virus at the initial stage. Hence, a more robust and alternate diagnosis technique is desirable. Recently, with the release of publicly available datasets of corona positive patients comprising of computed tomography (CT) and chest X-ray (CXR) imaging; scientists, researchers and healthcare experts are contributing for faster and automated diagnosis of COVID-19 by identifying pulmonary infections using deep learning approaches to achieve better cure and treatment. These datasets have limited samples concerned with the positive COVID-19 cases, which raise the challenge for unbiased learning. Following from this context, this article presents the random oversampling and weighted class loss function approach for unbiased fine-tuned learning (transfer learning) in various state-of-the-art deep learning approaches such as baseline ResNet, Inception-v3, Inception ResNet-v2, DenseNet169, and NASNetLarge to perform binary classification (as normal and COVID-19 cases) and also multi-class classification (as COVID-19, pneumonia, and normal case) of posteroanterior CXR images. Accuracy, precision, recall, loss, and area under the curve (AUC) are utilized to evaluate the performance of the models. Considering the experimental results, the performance of each model is scenario dependent; however, NASNetLarge displayed better scores in contrast to other architectures, which is further compared with other recently proposed approaches. This article also added the visual explanation to illustrate the basis of model classification and perception of COVID-19 in CXR images.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/ceb8bb50afd0/10489_2020_1900_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/26d28602a328/10489_2020_1900_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/63be4df0970d/10489_2020_1900_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/3c383791d3b2/10489_2020_1900_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/69c458e9400b/10489_2020_1900_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/49be739b0183/10489_2020_1900_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/72d69ce48d6b/10489_2020_1900_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/4784afa7edcc/10489_2020_1900_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/ceb8bb50afd0/10489_2020_1900_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/26d28602a328/10489_2020_1900_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/63be4df0970d/10489_2020_1900_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/3c383791d3b2/10489_2020_1900_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/69c458e9400b/10489_2020_1900_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/49be739b0183/10489_2020_1900_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/72d69ce48d6b/10489_2020_1900_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/4784afa7edcc/10489_2020_1900_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41dc/7568031/ceb8bb50afd0/10489_2020_1900_Fig8_HTML.jpg

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Automated diagnosis of COVID-19 with limited posteroanterior chest X-ray images using fine-tuned deep neural networks.

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[2]
COVID-19 and Pneumonia detection and web deployment from CT scan and X-ray images using deep learning.

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[3]
Improving explainable AI with patch perturbation-based evaluation pipeline: a COVID-19 X-ray image analysis case study.

Sci Rep. 2023-11-9

[4]
COVID-19 prediction based on hybrid Inception V3 with VGG16 using chest X-ray images.

Multimed Tools Appl. 2023-6-5

[5]
A Review Paper about Deep Learning for Medical Image Analysis.

Comput Math Methods Med. 2023

[6]
An overview of deep learning techniques for COVID-19 detection: methods, challenges, and future works.

Multimed Syst. 2023

[7]
Deep Convolutional Neural Networks for Detecting COVID-19 Using Medical Images: A Survey.

New Gener Comput. 2023

[8]
AI-based radiodiagnosis using chest X-rays: A review.

Front Big Data. 2023-4-6

[9]
Feature selection of pre-trained shallow CNN using the QLESCA optimizer: COVID-19 detection as a case study.

Appl Intell (Dordr). 2023-2-6

[10]
Survey of Explainable AI Techniques in Healthcare.

Sensors (Basel). 2023-1-5

本文引用的文献

[1]
Automatic detection of coronavirus disease (COVID-19) using X-ray images and deep convolutional neural networks.

Pattern Anal Appl. 2021

[2]
A deep learning algorithm using CT images to screen for Corona virus disease (COVID-19).

Eur Radiol. 2021-8

[3]
COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images.

Sci Rep. 2020-11-11

[4]
COVID-CAPS: A capsule network-based framework for identification of COVID-19 cases from X-ray images.

Pattern Recognit Lett. 2020-10

[5]
Covid-19: automatic detection from X-ray images utilizing transfer learning with convolutional neural networks.

Phys Eng Sci Med. 2020-4-3

[6]
Deep Learning COVID-19 Features on CXR Using Limited Training Data Sets.

IEEE Trans Med Imaging. 2020-5-8

[7]
The origin, transmission and clinical therapies on coronavirus disease 2019 (COVID-19) outbreak - an update on the status.

Mil Med Res. 2020-3-13

[8]
Switchable Normalization for Learning-to-Normalize Deep Representation.

IEEE Trans Pattern Anal Mach Intell. 2021-2

[9]
A transfer learning method with deep residual network for pediatric pneumonia diagnosis.

Comput Methods Programs Biomed. 2020-4

[10]
Deep learning in medical image analysis: A third eye for doctors.

J Stomatol Oral Maxillofac Surg. 2019-6-26

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