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编码人细胞外超氧化物歧化酶的互补DNA的分离与测序

Isolation and sequence of complementary DNA encoding human extracellular superoxide dismutase.

作者信息

Hjalmarsson K, Marklund S L, Engström A, Edlund T

出版信息

Proc Natl Acad Sci U S A. 1987 Sep;84(18):6340-4. doi: 10.1073/pnas.84.18.6340.

Abstract

A complementary DNA (cDNA) clone from a human placenta cDNA library encoding extracellular superoxide dismutase (EC-SOD; superoxide:superoxide oxidoreductase, EC 1.15.1.1) has been isolated and the nucleotide sequence determined. The cDNA has a very high G+C content. EC-SOD is synthesized with a putative 18-amino acid signal peptide, preceding the 222 amino acids in the mature enzyme, indicating that the enzyme is a secretory protein. The first 95 amino acids of the mature enzyme show no sequence homology with other sequenced proteins and there is one possible N-glycosylation site (Asn-89). The amino acid sequence from residues 96-193 shows strong homology (approximately 50%) with the final two-thirds of the sequences of all known eukaryotic CuZn SODs, whereas the homology with the P. leiognathi CuZn SOD is clearly lower. The ligands to Cu and Zn, the cysteines forming the intrasubunit disulfide bridge in the CuZn SODs, and the arginine found in all CuZn SODs in the entrance to the active site can all be identified in EC-SOD. A comparison with bovine CuZn SOD, the three-dimensional structure of which is known, reveals that the homologies occur in the active site and the divergences are in the part constituting the subunit contact area in CuZn SOD. Amino acid sequence 194-222 in the carboxyl-terminal end of EC-SOD is strongly hydrophilic and contains nine amino acids with a positive charge. This sequence probably confers the affinity of EC-SOD for heparin and heparan sulfate. An analysis of the amino acid sequence homologies with CuZn SODs from various species indicates that the EC-SODs may have evolved from the CuZn SODs before the evolution of fungi and plants.

摘要

从人胎盘cDNA文库中分离出一个编码细胞外超氧化物歧化酶(EC-SOD;超氧化物:超氧化物氧化还原酶,EC 1.15.1.1)的互补DNA(cDNA)克隆,并测定了其核苷酸序列。该cDNA的G+C含量非常高。EC-SOD合成时带有一个推定的18个氨基酸的信号肽,位于成熟酶的222个氨基酸之前,这表明该酶是一种分泌蛋白。成熟酶的前95个氨基酸与其他已测序的蛋白质没有序列同源性,并且有一个可能的N-糖基化位点(Asn-89)。96-193位氨基酸序列与所有已知真核生物铜锌超氧化物歧化酶序列的最后三分之二显示出很强的同源性(约50%),而与雷氏弱棘鱼铜锌超氧化物歧化酶的同源性明显较低。在EC-SOD中可以鉴定出与铜和锌结合的配体、在铜锌超氧化物歧化酶中形成亚基内二硫键的半胱氨酸以及在活性位点入口处所有铜锌超氧化物歧化酶中都存在的精氨酸。与已知三维结构的牛铜锌超氧化物歧化酶进行比较,发现同源性存在于活性位点,而差异存在于构成铜锌超氧化物歧化酶亚基接触区域的部分。EC-SOD羧基末端的194-222位氨基酸序列具有很强的亲水性,并且包含九个带正电荷的氨基酸。该序列可能赋予EC-SOD对肝素和硫酸乙酰肝素的亲和力。对来自不同物种的铜锌超氧化物歧化酶氨基酸序列同源性的分析表明,EC-SOD可能在真菌和植物进化之前就从铜锌超氧化物歧化酶进化而来。

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