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木耳目(担子菌门)的全球多样性及更新系统发育

Global Diversity and Updated Phylogeny of (Auriculariales, Basidiomycota).

作者信息

Wu Fang, Tohtirjap Ablat, Fan Long-Fei, Zhou Li-Wei, Alvarenga Renato L M, Gibertoni Tatiana B, Dai Yu-Cheng

机构信息

Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China.

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.

出版信息

J Fungi (Basel). 2021 Nov 3;7(11):933. doi: 10.3390/jof7110933.

DOI:10.3390/jof7110933
PMID:34829220
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8625027/
Abstract

has a worldwide distribution and is very important due to its edibility and medicinal properties. Morphological examinations and multi-gene phylogenetic analyses of 277 samples from 35 countries in Asia, Europe, North and South America, Africa, and Oceania were carried out. Phylogenetic analyses were based on ITS, nLSU, rpb1, and rpb2 sequences using methods of Maximum Likelihood and Bayesian Inference analyses. According to the morphological and/or molecular characters, 37 species were identified. Ten new species, and in the complex, , , , and in the complex, , and in the complex, are described. The two known species and , respectively belonging to the complex and the complex, are redefined, while , belonging to the complex, is validated. The morphological characters, photos, ecological traits, hosts and geographical distributions of those 37 species are outlined and discussed. Morphological differences and phylogenetic relations of species in five morphological complexes (the , the , the , the and the complexes) are elaborated. Synopsis data on comparisons of species in the five complexes are provided. An identification key for the accepted 37 species is proposed.

摘要

分布于世界各地,因其可食用性和药用特性而非常重要。对来自亚洲、欧洲、南北美洲、非洲和大洋洲35个国家的277个样本进行了形态学检查和多基因系统发育分析。系统发育分析基于ITS、nLSU、rpb1和rpb2序列,采用最大似然法和贝叶斯推断分析方法。根据形态和/或分子特征,鉴定出37个物种。描述了10个新物种,包括 复合体中的 、 复合体中的 、 、 、 以及 复合体中的 、 。重新定义了分别属于 复合体和 复合体的两个已知物种 和 ,同时,属于 复合体的 得到确认。概述并讨论了这37个物种的形态特征、照片、生态特征、寄主和地理分布。阐述了五个形态复合体( 复合体、 复合体、 复合体、 复合体和 复合体)中物种的形态差异和系统发育关系。提供了五个复合体中物种比较的概要数据。提出了已确认的37个物种的鉴定检索表。

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Carbohydr Polym. 2012 Jun 20;89(2):694-700. doi: 10.1016/j.carbpol.2012.03.078. Epub 2012 Apr 2.
6
Phylogeny and taxonomy of poroid and lamellate genera in the Auriculariales (Basidiomycota).耳匙菌目(担子菌门)多孔菌科和革菌科的系统发育和分类。
Mycologia. 2013 Sep-Oct;105(5):1219-30. doi: 10.3852/12-212. Epub 2013 May 26.
7
Pulsed electric field extraction enhanced anti-coagulant effect of fungal polysaccharide from Jew's ear (Auricularia auricula).脉冲电场提取增强银耳( Auricularia auricula )真菌多糖的抗凝血作用。
Phytochem Anal. 2013 Jan-Feb;24(1):36-40. doi: 10.1002/pca.2376. Epub 2012 Jun 12.
8
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
9
Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales).利用 RPB1 序列提高蘑菇(离褶伞科)的系统发育推断。
Am J Bot. 2002 Apr;89(4):688-98. doi: 10.3732/ajb.89.4.688.
10
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.RAxML-VI-HPC:基于最大似然法的系统发育分析,适用于数千个分类单元及混合模型。
Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23.