Fetal Neonatal Neuroimaging and Developmental Science Center, Boston Children's Hospital, Boston, Massachusetts, USA.
Department of Radiology, Harvard Medical School, Boston, Massachusetts, USA.
Magn Reson Med. 2022 Apr;87(4):1914-1922. doi: 10.1002/mrm.29106. Epub 2021 Dec 10.
Fetal brain Magnetic Resonance Imaging suffers from unpredictable and unconstrained fetal motion that causes severe image artifacts even with half-Fourier single-shot fast spin echo (HASTE) readouts. This work presents the implementation of a closed-loop pipeline that automatically detects and reacquires HASTE images that were degraded by fetal motion without any human interaction.
A convolutional neural network that performs automatic image quality assessment (IQA) was run on an external GPU-equipped computer that was connected to the internal network of the MRI scanner. The modified HASTE pulse sequence sent each image to the external computer, where the IQA convolutional neural network evaluated it, and then the IQA score was sent back to the sequence. At the end of the HASTE stack, the IQA scores from all the slices were sorted, and only slices with the lowest scores (corresponding to the slices with worst image quality) were reacquired.
The closed-loop HASTE acquisition framework was tested on 10 pregnant mothers, for a total of 73 acquisitions of our modified HASTE sequence. The IQA convolutional neural network, which was successfully employed by our modified sequence in real time, achieved an accuracy of 85.2% and area under the receiver operator characteristic of 0.899.
The proposed acquisition/reconstruction pipeline was shown to successfully identify and automatically reacquire only the motion degraded fetal brain HASTE slices in the prescribed stack. This minimizes the overall time spent on HASTE acquisitions by avoiding the need to repeat the entire stack if only few slices in the stack are motion-degraded.
胎儿脑部磁共振成像(MRI)受到不可预测和不受约束的胎儿运动的影响,即使使用半傅里叶单次激发快速自旋回波(HASTE)读取技术,也会导致严重的图像伪影。本研究介绍了一种闭环流水线的实现,该流水线可以自动检测和重新获取因胎儿运动而降级的 HASTE 图像,而无需任何人工交互。
在连接到 MRI 扫描仪内部网络的外部 GPU 计算机上运行了一个执行自动图像质量评估(IQA)的卷积神经网络。修改后的 HASTE 脉冲序列将每张图像发送到外部计算机,IQA 卷积神经网络在外部计算机上对其进行评估,然后将 IQA 分数发回序列。在 HASTE 堆栈的末尾,对所有切片的 IQA 分数进行排序,仅重新获取分数最低(对应图像质量最差的切片)的切片。
闭环 HASTE 采集框架在 10 名孕妇中进行了测试,共采集了 73 次我们修改后的 HASTE 序列。成功实时应用于我们修改后的序列的 IQA 卷积神经网络的准确率为 85.2%,接收器操作特性曲线下的面积为 0.899。
所提出的采集/重建流水线被证明可以成功识别并自动重新获取规定堆栈中仅因运动而降级的胎儿脑 HASTE 切片。如果堆栈中只有少数切片因运动而降级,则可以避免重复整个堆栈,从而最大限度地减少 HASTE 采集的总时间。