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马铃薯(茄属)中该基因家族的全基因组鉴定、特征分析及表达分析以及其在响应干旱和渗透胁迫中的作用

Genome-Wide Identification, Characterization and Expression Analysis of the Gene Family in Potato ( L.) and the Role of in Response to Drought and Osmotic Stress.

作者信息

Ma Rui, Liu Weigang, Li Shigui, Zhu Xi, Yang Jiangwei, Zhang Ning, Si Huaijun

机构信息

State Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou 730070, China.

College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China.

出版信息

Int J Mol Sci. 2021 Dec 16;22(24):13535. doi: 10.3390/ijms222413535.

Abstract

The potato ( L.), one of the most important food crops worldwide, is sensitive to environmental stresses. Sensor-responder complexes comprising calcineurin B-like (CBL) proteins and CBL-interacting protein kinases (CIPKs) not only modulate plant growth and development but also mediate numerous stress responses. Here, using a Hidden Markov Model and BLAST searches, 27 genes were identified in potato and divided into five groups by phylogenetic analysis and into two clades (intron-poor and intron-rich) by gene structure analysis. Quantitative reverse-transcription PCR (qRT-PCR) assays revealed that genes play important roles in plant growth, development and abiotic stress tolerance. Up-regulated expression of was significantly induced by drought, PEG6000 and ABA. StCIPK10 enhances both the ability of potato to scavenge reactive oxygen species and the content of corresponding osmoregulation substances, thereby strengthening tolerance to drought and osmotic stress. StCIPK10 is located at the intersection between the abscisic acid and abiotic stress signaling pathways, which control both root growth and stomatal closure in potato. In addition, StCIPK10 interacts with StCBL1, StCBL4, StCBL6, StCBL7, StCBL8, StCBL11 and StCBL12, and is specifically recruited to the plasma membrane by StCBL11.

摘要

马铃薯(Solanum tuberosum L.)是全球最重要的粮食作物之一,对环境胁迫敏感。由类钙调神经磷酸酶B蛋白(CBL)和CBL互作蛋白激酶(CIPK)组成的传感应答复合体不仅调节植物的生长发育,还介导多种胁迫反应。在此,利用隐马尔可夫模型和BLAST搜索,在马铃薯中鉴定出27个基因,通过系统发育分析将其分为五组,通过基因结构分析分为两个进化枝(内含子少和内含子多)。定量逆转录PCR(qRT-PCR)分析表明,这些基因在植物生长、发育和非生物胁迫耐受性中发挥重要作用。干旱、PEG6000和脱落酸显著诱导了StCIPK10的上调表达。StCIPK10增强了马铃薯清除活性氧的能力和相应渗透调节物质的含量,从而增强了对干旱和渗透胁迫的耐受性。StCIPK10位于脱落酸和非生物胁迫信号通路的交叉点,这两条通路控制着马铃薯的根系生长和气孔关闭。此外,StCIPK10与StCBL1、StCBL4、StCBL6、StCBL7、StCBL8、StCBL11和StCBL12相互作用,并被StCBL11特异性招募到质膜上。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0630/8708990/14e6fe22f263/ijms-22-13535-g001.jpg

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