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新种,一种从桃树根际土壤中分离出的固氮物种。

sp. nov., a nitrogen-fixing species isolated from the rhizosphere soil of a peach tree.

作者信息

Li Qin, Zuo Yin-Zhao, Gao Miao, Chen San-Feng

机构信息

State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing 100193, PR China.

Key Laboratory of Microbial Resources Collection and Preservation, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China.

出版信息

Int J Syst Evol Microbiol. 2022 Jan;72(1). doi: 10.1099/ijsem.0.005216.

Abstract

A nitrogen-fixing, endospore-forming, motile, rod-shaped, facultative aerobic bacterium, designated 81-11, was isolated from rhizosphere soil of a peach tree collected from Handan, Hebei, PR China. From the comparison of 16S rRNA gene sequence, the strain is most closely related to DSM 27463 (96.9 %) and DSM 23593 (96.7 %). The genome size of strain 81-11 was 4.4 Mb, comprising 4879 predicted genes with a DNA G+C content of 50.0 mol%. The average nucleotide identity values of genome sequences between the novel isolate and the type strains of related species DSM 27463 and DSM 23593 were 71.8 and 72.1 %, respectively. The major cellular fatty acids were anteiso-C(47.8 %), iso-C (15.5 %) and iso-C (13.0 %). Menaquinone-7 was the major respiratory quinone. The polar lipids contained phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, aminophospholipid, aminoglycopid, unknown polar lipids and unidentified aminophosphoglycolipid. Based on phylogenetic, genomic and phenotypic characteristics, strain 81-11 was classified as a novel species within the genus , for which the name sp. nov. is proposed. The type strain of is 81-11 (=JCM 34618=CGMCC 1.18907).

摘要

从中国河北省邯郸市桃树根际土壤中分离出一株固氮、产芽孢、具运动性、杆状、兼性需氧细菌,命名为81-11。通过16S rRNA基因序列比较,该菌株与DSM 27463(96.9%)和DSM 23593(96.7%)关系最为密切。菌株81-11的基因组大小为4.4 Mb,包含4879个预测基因,DNA G+C含量为50.0 mol%。该新分离菌株与相关物种DSM 27463和DSM 23593模式菌株的基因组序列平均核苷酸同一性值分别为71.8%和72.1%。主要细胞脂肪酸为anteiso-C(47.8%)、iso-C(15.5%)和iso-C(13.0%)。甲基萘醌-7是主要呼吸醌。极性脂质包含磷脂酰乙醇胺、磷脂酰甘油、二磷脂酰甘油、氨基磷脂、氨基糖脂、未知极性脂质和未鉴定的氨基磷酸糖脂。基于系统发育、基因组和表型特征,菌株81-11被归类为该属内的一个新物种,为此提出新物种名称sp. nov.。的模式菌株为81-11(=JCM 34618=CGMCC 1.18907)。

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