Li Zhaowu, Gao Junping, Wang Genhong, Wang Shuaibin, Chen Kai, Pu Wenxuan, Wang Yaofu, Xia Qingyou, Fan Xiaorong
Tobacco Research Institute of Technology Centre, China Tobacco Hunan Industrial Corporation, Changsha, China.
State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, China.
Front Genet. 2022 Feb 1;12:768942. doi: 10.3389/fgene.2021.768942. eCollection 2021.
The gibberellic acid stimulated Arabidopsis () gene family is critical for plant growth, development, and stress response. gene family has been studied in various plant species, however, the gene family in tobacco () have not been characterized in detail. In this study, we identified 18 genes in the tobacco genome, which were distributed to 13 chromosomes. All the proteins contained a conserved GASA domain and highly specific 12-cysteine residues at the C-terminus. Phylogenetic analysis divided the genes into three well-conserved subfamilies. Synteny analysis suggested that tandem and segmental duplications played an important role in the expansion of the gene family. -elements analysis showed that genes might influence different phytohormone and stress responses. Tissue expression analysis revealed that genes displayed unique or distinct expression patterns in different tissues, suggesting their potential roles in plant growth and development. We also found that the expression of genes were mostly regulated by abscisic and gibberellic acid, signifying their roles in the two phytohormone signaling pathways. Overall, these findings improve our understanding of genes and provided useful information for further studies on their molecular functions.
赤霉素刺激的拟南芥()基因家族对植物生长、发育及胁迫响应至关重要。该基因家族已在多种植物物种中得到研究,然而,烟草()中的基因家族尚未得到详细表征。在本研究中,我们在烟草基因组中鉴定出18个基因,它们分布于13条染色体上。所有蛋白质均含有一个保守的GASA结构域以及在C末端高度特异的12个半胱氨酸残基。系统发育分析将这些基因分为三个保守性良好的亚家族。共线性分析表明串联重复和片段重复在基因家族的扩张中发挥了重要作用。顺式作用元件分析表明基因可能影响不同的植物激素和胁迫响应。组织表达分析显示基因在不同组织中呈现独特或明显的表达模式,表明它们在植物生长和发育中的潜在作用。我们还发现基因的表达大多受脱落酸和赤霉素调控,这表明它们在这两种植物激素信号通路中的作用。总体而言,这些发现增进了我们对基因的理解,并为进一步研究其分子功能提供了有用信息。