Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, PR China.
Shenzhen Biyuan Environmental Protection Technic Co., Ltd., Shenzhen 518000, PR China.
Int J Syst Evol Microbiol. 2022 Feb;72(2). doi: 10.1099/ijsem.0.005264.
During a survey of microbial communities in the influent (ambient water) and effluent of a water purification facility with aeration and supplement of starch as carbon source, a novel bacterial strain, designated SZ9, was isolated from the effluent sample. Colonies of strain SZ9 were small (approximately 0.5-1.0 mm in diameter), creamy-white, circular, smooth, translucent and convex. Cells were facultative anaerobic, motile by means of a single polar flagellum, rod-shaped, multiplied by binary fission, Gram-stain-negative, oxidase-positive and catalase-negative. Growth occurred at 10-40 °C (optimum, 28 °C) and pH 5.5-8.0 (optimum, pH 7.5). The range of NaCl concentration for growth was 0-1.0 % (w/v), with an optimum of 0-0.5 % (w/v). Phylogenetic analysis based on 16S rRNA gene sequences suggested that strain SZ9 formed a lineage within the family of the class and showed the highest 16S rRNA gene sequence similarities to TH1-2 (92.44%), followed by SYSU XM001 (89.61 %), DRW22-8 (89.49 %) and WM6 (89.49%). The predominant fatty acids (>10 % of the total fatty acids) of strain SZ9 was summed feature 3 (comprising C 6 and/or C 7), summed feature 8 (C 6 and/or C 7) and C. The sole respiratory quinone was ubiquinone-10, and the major polar lipids were phosphatidylcholine and two unidentified glycolipids. The whole genome of strain SZ9 was 2 842 140 bp in size, including 2769 protein-coding genes, 37 tRNA genes and two rRNA genes, and the genomic G+C content was 41.4 mol%. The orthologous average nucleotide identity, average amino acid identity and digital DNA-DNA hybridization values between strain SZ9 and other genera within the family were 64.50-66.62 %, 46.96-54.17 % and 27.70-31.70 %, respectively. Therefore, based on the results of phenotypic, chemotaxonomic and phylogenetic analyses, the isolated strain SZ9 could be distinguished from other genera, suggesting that it represents a novel species of a novel genus in the family , for which the name gen. nov., sp. nov is proposed. The type strain is SZ9 (=CCTCC AB2021029=KCTC 82788).
在一项对曝气和补充淀粉作为碳源的水净化设施进水中和出水中微生物群落的调查中,从出水中的样本中分离到了一株新型细菌菌株,命名为 SZ9。SZ9 菌株的菌落较小(直径约为 0.5-1.0 毫米),呈乳白色、圆形、光滑、半透明且凸起。细胞为兼性厌氧菌,通过单一极鞭毛运动,呈杆状,通过二分分裂繁殖,革兰氏阴性,氧化酶阳性,过氧化氢酶阴性。生长温度为 10-40°C(最佳温度为 28°C),pH 值为 5.5-8.0(最佳 pH 值为 7.5)。SZ9 菌株生长的 NaCl 浓度范围为 0-1.0%(w/v),最佳浓度为 0-0.5%(w/v)。基于 16S rRNA 基因序列的系统发育分析表明,菌株 SZ9 形成了 纲 家族中的一个谱系,与 TH1-2(92.44%)的 16S rRNA 基因序列最相似,其次是 SYSU XM001(89.61%)、 DRW22-8(89.49%)和 WM6(89.49%)。菌株 SZ9 的主要脂肪酸(占总脂肪酸的>10%)为 sum feature 3(包含 C6 和/或 C7)、sum feature 8(C6 和/或 C7)和 C。唯一的呼吸醌是泛醌-10,主要的极性脂是磷脂酰胆碱和两种未鉴定的糖脂。菌株 SZ9 的全基因组大小为 2842140 bp,包括 2769 个蛋白编码基因、37 个 tRNA 基因和两个 rRNA 基因,基因组 G+C 含量为 41.4mol%。与 家族 中的其他属相比,菌株 SZ9 的直系同源平均核苷酸同一性、平均氨基酸同一性和数字 DNA-DNA 杂交值分别为 64.50-66.62%、46.96-54.17%和 27.70-31.70%。因此,基于表型、化学分类和系统发育分析的结果,分离到的菌株 SZ9 可以与其他属区分开来,表明它代表了 家族 中一个新属的一个新种,建议将其命名为 gen. nov.,sp. nov。模式菌株为 SZ9(=CCTCC AB2021029=KCTC 82788)。