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一种用于草莓叶片灰霉病诊断的高光谱数据三维卷积神经网络分类模型。

A Hyperspectral Data 3D Convolutional Neural Network Classification Model for Diagnosis of Gray Mold Disease in Strawberry Leaves.

作者信息

Jung Dae-Hyun, Kim Jeong Do, Kim Ho-Youn, Lee Taek Sung, Kim Hyoung Seok, Park Soo Hyun

机构信息

Smart Farm Research Center, Institute of Science and Technology (KIST), Gangneung-si, South Korea.

出版信息

Front Plant Sci. 2022 Mar 11;13:837020. doi: 10.3389/fpls.2022.837020. eCollection 2022.

Abstract

Gray mold disease is one of the most frequently occurring diseases in strawberries. Given that it spreads rapidly, rapid countermeasures are necessary through the development of early diagnosis technology. In this study, hyperspectral images of strawberry leaves that were inoculated with gray mold fungus to cause disease were taken; these images were classified into healthy and infected areas as seen by the naked eye. The areas where the infection spread after time elapsed were classified as the asymptomatic class. Square regions of interest (ROIs) with a dimensionality of 16 × 16 × 150 were acquired as training data, including infected, asymptomatic, and healthy areas. Then, 2D and 3D data were used in the development of a convolutional neural network (CNN) classification model. An effective wavelength analysis was performed before the development of the CNN model. Further, the classification model that was developed with 2D training data showed a classification accuracy of 0.74, while the model that used 3D data acquired an accuracy of 0.84; this indicated that the 3D data produced slightly better performance. When performing classification between healthy and asymptomatic areas for developing early diagnosis technology, the two CNN models showed a classification accuracy of 0.73 with regards to the asymptomatic ones. To increase accuracy in classifying asymptomatic areas, a model was developed by smoothing the spectrum data and expanding the first and second derivatives; the results showed that it was possible to increase the asymptomatic classification accuracy to 0.77 and reduce the misclassification of asymptomatic areas as healthy areas. Based on these results, it is concluded that the proposed 3D CNN classification model can be used as an early diagnosis sensor of gray mold diseases since it produces immediate on-site analysis results of hyperspectral images of leaves.

摘要

灰霉病是草莓中最常发生的病害之一。鉴于其传播迅速,有必要通过开发早期诊断技术来迅速采取应对措施。在本研究中,对接种灰霉病菌导致发病的草莓叶片进行了高光谱图像采集;这些图像按肉眼所见分为健康区域和感染区域。随着时间推移感染扩散的区域被归类为无症状类别。获取了尺寸为16×16×150的方形感兴趣区域(ROI)作为训练数据,包括感染区域、无症状区域和健康区域。然后,将二维和三维数据用于卷积神经网络(CNN)分类模型的开发。在开发CNN模型之前进行了有效波长分析。此外,用二维训练数据开发的分类模型的分类准确率为0.74,而使用三维数据的模型的准确率为0.84;这表明三维数据的性能略好。在为开发早期诊断技术而对健康区域和无症状区域进行分类时,这两个CNN模型对无症状区域的分类准确率为0.73。为了提高无症状区域的分类准确率,通过对光谱数据进行平滑处理以及扩展一阶和二阶导数开发了一个模型;结果表明,可以将无症状分类准确率提高到0.77,并减少将无症状区域误分类为健康区域的情况。基于这些结果,可以得出结论,所提出的三维CNN分类模型可作为灰霉病的早期诊断传感器,因为它能对叶片的高光谱图像产生即时的现场分析结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97fe/8963811/765dde5b014c/fpls-13-837020-g001.jpg

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