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tRNA 衍生片段 tRF-Leu-AAG 在胰腺癌细胞中的生物学行为。

The biological behavior of tRNA-derived fragment tRF-Leu-AAG in pancreatic cancer cells.

机构信息

Graduate School of Dalian Medical University, Dalian Medical University, Dalian, Liaoning, China.

Department of Hepatobiliary Surgery, The Affiliated Changzhou No. 2 People's Hospital of Nanjing Medical University, Changzhou, Jiangsu, China.

出版信息

Bioengineered. 2022 Apr;13(4):10617-10628. doi: 10.1080/21655979.2022.2064206.

DOI:10.1080/21655979.2022.2064206
PMID:35442152
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9161985/
Abstract

Pancreatic cancer (PC) is a life-threatening cancer with increasing incidence in developed countries. Reports indicate that tRNA-derived fragments (tRFs) are possible therapeutic targets and biomarkers for cancer treatment. Nonetheless, the effect of tRF-Leu-AAG on PC is unclear. This study aims to explore the role of tRF-Leu-AAG and upstream frameshift mutant 1 (UPF1) in the development of PC and its potential underlying mechanisms. High-throughput second-generation sequencing techniques were used to detect the expression of tRFs in cancerous and adjacent normal tissues from PC patients. The role of tRF-Leu-AAG proliferation in PC cells was investigated via the Cell Counting Kit-8 (CCK8) assay. The effect of tRF-Leu-AAG on the invasion and migration ability of PC cells was also determined by the transwell assay. Thereafter, the downstream target genes of tRF-Leu-AAG were comprehensively predicted using bioinformatics analysis databases. We also used the Dual-Luciferase Reporter assay to assess the nexus between tRF-Leu-AAG and UPF1. Eventually, Western Blot was used to validate the expression of UPF1 in PC cells. A total of 33 tRF expressions significantly varied from PC patients. RT-qPCR confirmed that the expression of tRF-Leu-AAG was observably up-regulated in PC cells as compared to the control cells. Importantly, knockdown of tRF-Leu-AAG observably inhibited cell proliferation, migration, and invasion. Furthermore, according to the predicted frameshift database results, the UPF1 acted as downstream target genes for tRF-Leu-AAG and significantly down-regulated UPF1 expression.

摘要

胰腺癌(PC)是一种危及生命的癌症,在发达国家的发病率不断上升。有报道称,tRNA 衍生片段(tRFs)可能是癌症治疗的治疗靶点和生物标志物。然而,tRF-Leu-AAG 对 PC 的影响尚不清楚。本研究旨在探讨 tRF-Leu-AAG 和上游移码突变 1(UPF1)在 PC 发生发展中的作用及其潜在机制。采用高通量第二代测序技术检测 PC 患者癌组织和相邻正常组织中 tRFs 的表达。通过细胞计数试剂盒-8(CCK8)检测 tRF-Leu-AAG 对 PC 细胞增殖的作用。通过 Transwell 测定法测定 tRF-Leu-AAG 对 PC 细胞侵袭和迁移能力的影响。此后,利用生物信息学分析数据库综合预测 tRF-Leu-AAG 的下游靶基因。我们还使用双荧光素酶报告基因检测评估 tRF-Leu-AAG 与 UPF1 之间的联系。最后,采用 Western blot 验证 PC 细胞中 UPF1 的表达。共有 33 个 tRF 表达水平在 PC 患者中明显不同。实时荧光定量 PCR 结果证实,与对照组细胞相比,PC 细胞中 tRF-Leu-AAG 的表达明显上调。重要的是,敲低 tRF-Leu-AAG 可明显抑制细胞增殖、迁移和侵袭。此外,根据预测的移码数据库结果,UPF1 作为 tRF-Leu-AAG 的下游靶基因,并显著下调 UPF1 的表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/ae7195b7b98f/KBIE_A_2064206_F0006_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/35504e25a089/KBIE_A_2064206_UF0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/dba35ce731fe/KBIE_A_2064206_F0001_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/7c5b6ecd7697/KBIE_A_2064206_F0002_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/e8189eb94790/KBIE_A_2064206_F0003_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/cbacf95c2aa9/KBIE_A_2064206_F0004_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/95813b41a83e/KBIE_A_2064206_F0005_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/ae7195b7b98f/KBIE_A_2064206_F0006_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/35504e25a089/KBIE_A_2064206_UF0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/dba35ce731fe/KBIE_A_2064206_F0001_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/7c5b6ecd7697/KBIE_A_2064206_F0002_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/e8189eb94790/KBIE_A_2064206_F0003_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/cbacf95c2aa9/KBIE_A_2064206_F0004_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/95813b41a83e/KBIE_A_2064206_F0005_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e4c/9161985/ae7195b7b98f/KBIE_A_2064206_F0006_OC.jpg

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