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全程序性细胞死亡相关长链非编码RNA-微小RNA-信使RNA网络分析揭示长链非编码RNA SNHG7参与结肠腺癌的化疗耐药

Analysis of PANoptosis-Related LncRNA-miRNA-mRNA Network Reveals LncRNA SNHG7 Involved in Chemo-Resistance in Colon Adenocarcinoma.

作者信息

Huang Jingjing, Jiang Shiyao, Liang Lu, He Hua, Liu Yueying, Cong Li, Jiang Yiqun

机构信息

The Key Laboratory of Model Animal and Stem Cell Biology in Hunan Province, Hunan Normal University, Changsha, China.

School of Medicine, Hunan Normal University, Changsha, China.

出版信息

Front Oncol. 2022 May 12;12:888105. doi: 10.3389/fonc.2022.888105. eCollection 2022.

Abstract

Colon adenocarcinoma (COAD) is one of the most common malignancies, and its metastatic lesions are the leading cause of death in COAD patients. PANoptosis is a recently identified pathway for programmed cell death implicated in developing COAD. Long non-coding RNAs (lncRNAs) are key regulators of cancer occurrence and progress. Although their function has captured much attention in COAD, the relationship between COAD metastasis-associated lncRNA expression and PANoptosis remains elusive. Therefore, this study aimed to explore the potential regulatory roles of metastasis- and PANoptosis-associated lncRNAs in COAD. Nine lncRNAs associated with metastasis and PANoptosis in COAD were identified from The Cancer Genome Atlas (TCGA) and GEO databases. Their functions were analyzed by multiple bioinformatics methods, and the lncRNA-miRNA-mRNA network was constructed. Multivariate Cox analysis identified one lncRNA (SNHG7) significantly related to COAD prognosis. Subsequent analyses showed its expression correlated with tumor stage and lymph node metastasis. Moreover, drug sensitivity analysis and experiments suggest that lncRNA SNHG7 contributes to drug resistance in COAD. In summary, lncRNA SNHG7 is a potential target for diagnosing and treating COAD and plays a crucial role in regulating apoptosis, metastasis, and drug resistance in COAD.

摘要

结肠腺癌(COAD)是最常见的恶性肿瘤之一,其转移灶是COAD患者死亡的主要原因。泛凋亡是最近发现的一种与COAD发生相关的程序性细胞死亡途径。长链非编码RNA(lncRNA)是癌症发生和进展的关键调节因子。尽管它们的功能在COAD中备受关注,但COAD转移相关lncRNA表达与泛凋亡之间的关系仍不清楚。因此,本研究旨在探讨转移和泛凋亡相关lncRNA在COAD中的潜在调控作用。从癌症基因组图谱(TCGA)和GEO数据库中鉴定出9个与COAD转移和泛凋亡相关的lncRNA。通过多种生物信息学方法分析它们的功能,并构建lncRNA-miRNA-mRNA网络。多变量Cox分析确定了一个与COAD预后显著相关的lncRNA(SNHG7)。后续分析表明其表达与肿瘤分期和淋巴结转移相关。此外,药物敏感性分析和实验表明lncRNA SNHG7导致COAD中的耐药性。总之,lncRNA SNHG7是COAD诊断和治疗的潜在靶点,在调节COAD的凋亡、转移和耐药性方面发挥关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b19/9133343/01d63373f528/fonc-12-888105-g001.jpg

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