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CRISPR基因编辑在……中的技巧、窍门及潜在陷阱

Tips, Tricks, and Potential Pitfalls of CRISPR Genome Editing in .

作者信息

Antony Jacob S, Hinz John M, Wyrick John J

机构信息

School of Molecular Biosciences, Washington State University, Pullman, WA, United States.

Center for Reproductive Biology, Washington State University, Pullman, WA, United States.

出版信息

Front Bioeng Biotechnol. 2022 May 30;10:924914. doi: 10.3389/fbioe.2022.924914. eCollection 2022.

Abstract

The versatility of clustered regularly interspaced short palindromic repeat (CRISPR)-associated (Cas) genome editing makes it a popular tool for many research and biotechnology applications. Recent advancements in genome editing in eukaryotic organisms, like fungi, allow for precise manipulation of genetic information and fine-tuned control of gene expression. Here, we provide an overview of CRISPR genome editing technologies in yeast, with a particular focus on . We describe the tools and methods that have been previously developed for genome editing in and discuss tips and experimental tricks for promoting efficient, marker-free genome editing in this model organism. These include sgRNA design and expression, multiplexing genome editing, optimizing Cas9 expression, allele-specific editing in diploid cells, and understanding the impact of chromatin on genome editing. Finally, we summarize recent studies describing the potential pitfalls of using CRISPR genome targeting in yeast, including the induction of background mutations.

摘要

成簇规律间隔短回文重复序列(CRISPR)相关(Cas)基因组编辑的多功能性使其成为许多研究和生物技术应用中常用的工具。真核生物(如真菌)基因组编辑的最新进展使得对遗传信息进行精确操作和对基因表达进行微调控制成为可能。在这里,我们概述了酵母中的CRISPR基因组编辑技术,特别关注……我们描述了先前为……基因组编辑开发的工具和方法,并讨论了在这种模式生物中促进高效、无标记基因组编辑的技巧和实验窍门。这些包括sgRNA设计和表达、多重基因组编辑、优化Cas9表达、二倍体细胞中的等位基因特异性编辑以及了解染色质对基因组编辑的影响。最后,我们总结了最近描述在酵母中使用CRISPR基因组靶向潜在陷阱的研究,包括背景突变的诱导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e967/9190257/f5f926768776/fbioe-10-924914-g001.jpg

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