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基于图同构网络的功能连接组识别高功能自闭症青年个体:一项初步研究。

Identification of Young High-Functioning Autism Individuals Based on Functional Connectome Using Graph Isomorphism Network: A Pilot Study.

作者信息

Yang Sihong, Jin Dezhi, Liu Jun, He Ye

机构信息

School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing 100876, China.

出版信息

Brain Sci. 2022 Jul 5;12(7):883. doi: 10.3390/brainsci12070883.

DOI:10.3390/brainsci12070883
PMID:35884690
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9315722/
Abstract

Accumulated studies have determined the changes in functional connectivity in autism spectrum disorder (ASD) and spurred the application of machine learning for classifying ASD. Graph Neural Network provides a new method for network analysis in brain disorders to identify the underlying network features associated with functional deficits. Here, we proposed an improved model of Graph Isomorphism Network (GIN) that implements the Weisfeiler-Lehman (WL) graph isomorphism test to learn the graph features while taking into account the importance of each node in the classification to improve the interpretability of the algorithm. We applied the proposed method on multisite datasets of resting-state functional connectome from Autism Brain Imaging Data Exchange (ABIDE) after stringent quality control. The proposed method outperformed other commonly used classification methods on five different evaluation metrics. We also identified salient ROIs in visual and frontoparietal control networks, which could provide potential neuroimaging biomarkers for ASD identification.

摘要

大量研究已确定了自闭症谱系障碍(ASD)中功能连接性的变化,并推动了机器学习在ASD分类中的应用。图神经网络为脑部疾病的网络分析提供了一种新方法,以识别与功能缺陷相关的潜在网络特征。在此,我们提出了一种改进的图同构网络(GIN)模型,该模型实施了魏斯费勒-莱曼(WL)图同构测试,以学习图特征,同时考虑到每个节点在分类中的重要性,以提高算法的可解释性。在经过严格的质量控制后,我们将所提出的方法应用于来自自闭症脑成像数据交换(ABIDE)的静息态功能连接组多站点数据集。在所提出的方法在五个不同的评估指标上优于其他常用的分类方法。我们还在视觉和额顶叶控制网络中识别出了显著的感兴趣区域(ROI),这可为ASD识别提供潜在的神经影像生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/fced3a2fdf80/brainsci-12-00883-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/8f26051b7bfa/brainsci-12-00883-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/441b15d0ca09/brainsci-12-00883-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/74c72dfcc26d/brainsci-12-00883-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/fced3a2fdf80/brainsci-12-00883-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/8f26051b7bfa/brainsci-12-00883-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/441b15d0ca09/brainsci-12-00883-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/74c72dfcc26d/brainsci-12-00883-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c903/9315722/fced3a2fdf80/brainsci-12-00883-g004.jpg

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本文引用的文献

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Neural circuit pathology driven by Shank3 mutation disrupts social behaviors.Shank3 基因突变驱动的神经回路病变破坏社会行为。
Cell Rep. 2022 Jun 7;39(10):110906. doi: 10.1016/j.celrep.2022.110906.
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Multi-site clustering and nested feature extraction for identifying autism spectrum disorder with resting-state fMRI.多站点聚类和嵌套特征提取用于基于静息态 fMRI 识别自闭症谱系障碍。
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Autistic Spectrum Disorder Detection and Structural Biomarker Identification Using Self-Attention Model and Individual-Level Morphological Covariance Brain Networks.
使用自注意力模型和个体水平形态协方差脑网络进行自闭症谱系障碍检测和结构生物标志物识别
Front Neurosci. 2021 Oct 8;15:756868. doi: 10.3389/fnins.2021.756868. eCollection 2021.
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BMC Bioinformatics. 2021 Jul 22;22(1):379. doi: 10.1186/s12859-021-04295-1.
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Modeling dynamic characteristics of brain functional connectivity networks using resting-state functional MRI.利用静息态功能磁共振成像对脑功能连接网络的动态特性进行建模。
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Gray matter abnormalities follow non-random patterns of co-alteration in autism: Meta-connectomic evidence.自闭症中灰质异常呈非随机的共同改变模式:荟萃连接组学证据。
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Understanding Graph Isomorphism Network for rs-fMRI Functional Connectivity Analysis.理解用于静息态功能磁共振成像功能连接分析的图同构网络
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