Semenova Ekaterina M, Babich Tamara L, Sokolova Diyana S, Ershov Alexey P, Raievska Yeva I, Bidzhieva Salimat K, Stepanov Alexey L, Korneykova Maria V, Myazin Vladimir A, Nazina Tamara N
Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia.
Soil Department, Moscow State University, 119991 Moscow, Russia.
Microorganisms. 2022 Jul 24;10(8):1490. doi: 10.3390/microorganisms10081490.
The development of Arctic regions leads to pollution of marine and coastal environments with oil and petroleum products. The purpose of this work was to determine the diversity of microbial communities in seawater, as well as in littoral and coastal soil, and the potential ability of their members to degrade hydrocarbons degradation and to isolate oil-degrading bacteria. Using high-throughput sequencing of the V4 region of the 16S rRNA gene, the dominance of bacteria in polar communities was shown, the proportion of archaea did not exceed 2% (of the total number of sequences in the libraries). Archaea inhabiting the seawater belonged to the genera and and to the family. In the polluted samples, members of the Gammaproteobacteria, Alphaproteobacteria, and Actinomycetes classes predominated; bacteria of the classes Bacteroidia, Clostridia, Acidimicrobiia, Planctomycetia, and Deltaproteobacteria were less represented. Using the iVikodak program and KEGG database, the potential functional characteristics of the studied prokaryotic communities were predicted. Bacteria were potentially involved in nitrogen and sulfur cycles, in degradation of benzoate, terephthalate, fatty acids, and alkanes. A total of 19 strains of bacteria of the genera , , , , , and were isolated from the studied samples. Among them were psychrotolerant and psychrophilic bacteria growing in seawater and utilizing crude oil, diesel fuel, and motor oils. The data obtained suggest that the studied microbial communities could participate in the removal of hydrocarbons from arctic seawater and coastal soils and suggested the possibility of the application of the isolates for the bioaugmentation of oil-contaminated polar environments.
北极地区的开发导致海洋和沿海环境受到石油和石油产品的污染。这项工作的目的是确定海水、滨海和沿海土壤中微生物群落的多样性,以及其成员降解碳氢化合物的潜在能力,并分离出石油降解细菌。通过对16S rRNA基因V4区域的高通量测序,显示了极地群落中细菌的优势地位,古菌的比例不超过文库中序列总数的2%。栖息在海水中的古菌属于 属和 属以及 科。在受污染的样本中,γ-变形菌纲、α-变形菌纲和放线菌纲的成员占主导地位;拟杆菌纲、梭菌纲、酸微菌纲、浮霉菌纲和δ-变形菌纲的细菌代表性较低。使用iVikodak程序和KEGG数据库,预测了所研究的原核生物群落的潜在功能特征。细菌可能参与氮和硫循环,以及苯甲酸、对苯二甲酸、脂肪酸和烷烃的降解。从所研究的样本中总共分离出了19株属于 属、 属、 属、 属、 属和 属的细菌。其中有耐冷菌和嗜冷菌,它们生长在海水中,利用原油、柴油和机油。获得的数据表明,所研究的微生物群落可能参与从北极海水和沿海土壤中去除碳氢化合物,并表明了将分离物应用于石油污染极地环境生物强化的可能性。