Bhargav Anasuya, Chaurasia Pratibha, Kumar Rohit, Ramachandran Srinivasan
Informatics and Big Data, Council of Scientific and Industrial Research - Institute of Genomics and Integrative Biology (CSIR-IGIB), Room No. 130, Mathura Road, New Delhi, 110025 India.
Academy of Scientific and Innovative Research (AcSIR), Ghaziabad- 201002, India.
Struct Chem. 2022;33(6):2169-2177. doi: 10.1007/s11224-022-02035-6. Epub 2022 Aug 25.
The COVID-19 pandemic has immensely impacted global health causing colossal damage. The recent outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has increased the quest to explore phytochemicals as treatment options. We summarize phytochemicals with activity against various coronaviruses including SARS-CoV and Middle East respiratory syndrome coronavirus (MERS-CoV). We compiled 705 phytochemical compounds through text mining of 893 PubMed articles. The physicochemical properties including molecular weight, lipophilicity, and the number of hydrogen bond donors and acceptors were determined from the structures of these compounds. A structure-based evaluation of these properties with respect to drug likeness showed that most compounds have a positive score of drug likeness. QSAR analysis showed that 5 descriptors, namely polar surface area, relative polar surface area, number of hydrogen bond donors, solubility, and lipophilicity, are significantly related to IC50. We envisage that these phytochemicals could be further explored for developing new potential therapeutic molecules for COVID-19.
The online version contains supplementary material available at 10.1007/s11224-022-02035-6.
新冠疫情对全球健康造成了巨大影响,带来了巨大破坏。近期严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的爆发,增加了对探索植物化学物质作为治疗选择的追求。我们总结了对包括SARS-CoV和中东呼吸综合征冠状病毒(MERS-CoV)在内的各种冠状病毒具有活性的植物化学物质。我们通过对893篇PubMed文章进行文本挖掘,汇编了705种植物化学化合物。根据这些化合物的结构确定了其物理化学性质,包括分子量、亲脂性以及氢键供体和受体的数量。基于结构对这些性质进行的类药性评估表明,大多数化合物的类药性得分呈正值。定量构效关系(QSAR)分析表明,5个描述符,即极性表面积、相对极性表面积、氢键供体数量、溶解度和亲脂性,与半数抑制浓度(IC50)显著相关。我们设想,可以进一步探索这些植物化学物质,以开发针对新冠病毒的新型潜在治疗分子。
在线版本包含可在10.1007/s11224-022-02035-6获取的补充材料。