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Rasiella rasia 属新种,新种,属于黄杆菌科,从海水再循环水产养殖系统中分离得到。

Rasiella rasia gen. nov. sp. nov. within the family Flavobacteriaceae isolated from seawater recirculating aquaculture system.

机构信息

Department of Microbiology, Pukyong National University, Busan, 48513, Republic of Korea.

Biotechnology Research Division, National Institute of Fisheries Science, Busan, 46083, Republic of Korea.

出版信息

J Microbiol. 2022 Nov;60(11):1070-1076. doi: 10.1007/s12275-022-2099-7. Epub 2022 Oct 17.

Abstract

A novel bacterium designated RR4-40 was isolated from a biofilter of seawater recirculating aquaculture system in Busan, South Korea. Cells are strictly aerobic, Gram-negative, irregular short rod, non-motile, and oxidase- and catalase-negative. Growth was observed at 15-30°C, 0.5-6% NaCl (w/v), and pH 5.0-9.5. The strain grew optimally at 28°C, 3% salinity (w/v), and pH 8.5. The phylogenetic analysis based on 16S rRNA gene sequences showed that strain RR4-40 was most closely related to Marinirhabdus gelatinilytica NH83 (94.16% of 16S rRNA gene similarity) and formed a cluster with genera within the family Flavobacteriaceae. The values of the average nucleotide identity (ANI), digital DNA-DNA hybridization (dDDH), and average amino acid identity (AAI) between genomes of strain RR4-40 and M. gelatinilytica NH83 were 72.91, 18.2, and 76.84%, respectively, and the values against the strains in the other genera were lower than those. The major fatty acids were iso-C (31.34%), iso-C 3-OH (13.65%), iso-C 3-OH (10.61%), and iso-C G (10.38%). The polar lipids comprised phosphatidylglycerol, diphosphatidylglycerol, aminophospholipid, aminolipid, glycolipid, and sphingolipid. The major respiratory quinone was menaquinone-6 (MK-6) and the DNA G + C content of strain RR4-40 was 37.4 mol%. According to the polyphasic analysis, strain RR4-40 is considered to represent a novel genus within the family Flavobacteriaceae, for which the name Rasiella rasia gen. nov, sp. nov. is proposed. The type strain is RR4-40 (= KCTC 52650 = MCCC 1K04210).

摘要

一株新的细菌菌株 RR4-40 从韩国釜山的海水再循环水产养殖系统的生物滤池中分离得到。细胞是严格需氧的、革兰氏阴性的、不规则短杆状、非运动的、氧化酶和过氧化氢酶阴性。在 15-30°C、0.5-6%(w/v)盐度和 pH5.0-9.5 的条件下可以观察到生长。菌株在 28°C、3%(w/v)盐度和 pH8.5 下生长最佳。基于 16S rRNA 基因序列的系统发育分析表明,菌株 RR4-40 与 Marinirhabdus gelatinilytica NH83 最为密切相关(16S rRNA 基因相似度为 94.16%),并与黄杆菌科的属形成一个聚类。菌株 RR4-40 与 M. gelatinilytica NH83 之间的全基因组平均核苷酸同一性(ANI)、数字 DNA-DNA 杂交(dDDH)和平均氨基酸同一性(AAI)值分别为 72.91%、18.2%和 76.84%,而与其他属的菌株的这些值则较低。主要脂肪酸为异-C(31.34%)、异-C 3-OH(13.65%)、异-C 3-OH(10.61%)和异-C G(10.38%)。极性脂包括磷脂酰甘油、双磷脂酰甘油、胺磷脂、胺脂、糖脂和神经酰胺脂。主要呼吸醌为甲萘醌-6(MK-6),菌株 RR4-40 的 DNA G+C 含量为 37.4mol%。根据多相分析,菌株 RR4-40 被认为代表黄杆菌科的一个新属,建议将其命名为 Rasiella rasia 属,nov. 种。模式菌株为 RR4-40(=KCTC 52650=MCCC 1K04210)。

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