Department of Microbiology, Pukyong National University, Busan, 48513, Republic of Korea.
Biotechnology Research Division, National Institute of Fisheries Science, Busan, 46083, Republic of Korea.
J Microbiol. 2022 Nov;60(11):1070-1076. doi: 10.1007/s12275-022-2099-7. Epub 2022 Oct 17.
A novel bacterium designated RR4-40 was isolated from a biofilter of seawater recirculating aquaculture system in Busan, South Korea. Cells are strictly aerobic, Gram-negative, irregular short rod, non-motile, and oxidase- and catalase-negative. Growth was observed at 15-30°C, 0.5-6% NaCl (w/v), and pH 5.0-9.5. The strain grew optimally at 28°C, 3% salinity (w/v), and pH 8.5. The phylogenetic analysis based on 16S rRNA gene sequences showed that strain RR4-40 was most closely related to Marinirhabdus gelatinilytica NH83 (94.16% of 16S rRNA gene similarity) and formed a cluster with genera within the family Flavobacteriaceae. The values of the average nucleotide identity (ANI), digital DNA-DNA hybridization (dDDH), and average amino acid identity (AAI) between genomes of strain RR4-40 and M. gelatinilytica NH83 were 72.91, 18.2, and 76.84%, respectively, and the values against the strains in the other genera were lower than those. The major fatty acids were iso-C (31.34%), iso-C 3-OH (13.65%), iso-C 3-OH (10.61%), and iso-C G (10.38%). The polar lipids comprised phosphatidylglycerol, diphosphatidylglycerol, aminophospholipid, aminolipid, glycolipid, and sphingolipid. The major respiratory quinone was menaquinone-6 (MK-6) and the DNA G + C content of strain RR4-40 was 37.4 mol%. According to the polyphasic analysis, strain RR4-40 is considered to represent a novel genus within the family Flavobacteriaceae, for which the name Rasiella rasia gen. nov, sp. nov. is proposed. The type strain is RR4-40 (= KCTC 52650 = MCCC 1K04210).
一株新的细菌菌株 RR4-40 从韩国釜山的海水再循环水产养殖系统的生物滤池中分离得到。细胞是严格需氧的、革兰氏阴性的、不规则短杆状、非运动的、氧化酶和过氧化氢酶阴性。在 15-30°C、0.5-6%(w/v)盐度和 pH5.0-9.5 的条件下可以观察到生长。菌株在 28°C、3%(w/v)盐度和 pH8.5 下生长最佳。基于 16S rRNA 基因序列的系统发育分析表明,菌株 RR4-40 与 Marinirhabdus gelatinilytica NH83 最为密切相关(16S rRNA 基因相似度为 94.16%),并与黄杆菌科的属形成一个聚类。菌株 RR4-40 与 M. gelatinilytica NH83 之间的全基因组平均核苷酸同一性(ANI)、数字 DNA-DNA 杂交(dDDH)和平均氨基酸同一性(AAI)值分别为 72.91%、18.2%和 76.84%,而与其他属的菌株的这些值则较低。主要脂肪酸为异-C(31.34%)、异-C 3-OH(13.65%)、异-C 3-OH(10.61%)和异-C G(10.38%)。极性脂包括磷脂酰甘油、双磷脂酰甘油、胺磷脂、胺脂、糖脂和神经酰胺脂。主要呼吸醌为甲萘醌-6(MK-6),菌株 RR4-40 的 DNA G+C 含量为 37.4mol%。根据多相分析,菌株 RR4-40 被认为代表黄杆菌科的一个新属,建议将其命名为 Rasiella rasia 属,nov. 种。模式菌株为 RR4-40(=KCTC 52650=MCCC 1K04210)。