Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo, 315800, PR China.
Ningbo Institute of Marine Medicine, Peking University, Ningbo, 315800, PR China.
Int J Syst Evol Microbiol. 2022 Oct;72(10). doi: 10.1099/ijsem.0.005544.
A Gram-negative, rod-shaped, non-motile and strictly aerobic bacterium, designated NBU1238, was isolated from marine sediment sampled on Meishan Island located in the East China Sea. Strain NBU1238 was able to grow optimally at 28-32 °C, at pH 7.5 and with no NaCl. Catalase and oxidase activities, HS production and hydrolysis of Tweens 40 and 60 were positive. Methyl red reaction, Voges-Proskauer test and hydrolysis of starch, casein and Tweens 20 and 80 were negative. The major cellular fatty acids were iso-C, C, C 9 and C. The only respiratory quinone was menaquinone-9. The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylmethylethanolamine. The 16S rRNA gene sequence of strain NBU1238 showed 95.6, 95.6, 94.8 and 93.8% sequence similarity to GKX, G-1-1-1, MC 3726 and A4T-83, respectively. Phylogenetic analyses indicated that strain NBU1238 clustered with the genus and was closely related to strains GKX, MC 3726 and G-1-1-1. The average nucleotide identity and digital DNA-DNA hybridization values between strain NBU1238 and related species of genus were well below the threshold limit for prokaryotic species delineation. The DNA G+C content of the genomic DNA was 65.0 mol%. Based on its phenotypic, chemotaxonomic and genotypic data, strain NBU1238 is considered to be a representative of a novel species in the genus , for which the name sp. nov. is proposed. The type strain is NBU1238 (=KCTC 82227=MCCC 1K04772).
一株革兰氏阴性、杆状、非运动和严格需氧的细菌,被命名为 NBU1238,从位于东海的梅山岛的海洋沉积物中分离出来。菌株 NBU1238 能够在 28-32°C、pH7.5 和没有 NaCl 的条件下最佳生长。过氧化氢酶和氧化酶活性、HS 产生以及吐温 40 和 60 的水解为阳性。甲基红反应、Voges-Proskauer 试验以及淀粉、酪蛋白和吐温 20 和 80 的水解为阴性。主要的细胞脂肪酸是 iso-C、C、C9 和 C。唯一的呼吸醌是menaquinone-9。主要的极性脂是双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和磷脂酰甲乙醇胺。菌株 NBU1238 的 16S rRNA 基因序列与 GKX、G-1-1-1、MC 3726 和 A4T-83 的序列相似性分别为 95.6%、95.6%、94.8%和 93.8%。系统发育分析表明,菌株 NBU1238 与属内的其他种聚类,并与菌株 GKX、MC 3726 和 G-1-1-1 密切相关。菌株 NBU1238 与属内相关种的平均核苷酸同一性和数字 DNA-DNA 杂交值均远低于原核种界定的阈值。基因组 DNA 的 G+C 含量为 65.0mol%。基于其表型、化学分类和基因型数据,菌株 NBU1238 被认为是属内一个新种的代表,因此提议使用 sp. nov. 作为该新种的名称。模式菌株为 NBU1238(=KCTC 82227=MCCC 1K04772)。