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中山冷杆菌,一株分离自南极土壤的放线菌。

Cryobacterium zhongshanensis sp. nov., an actinobacterium isolated from Antarctic soil.

机构信息

College of Marine Life Sciences, Ocean University of China, Qingdao, 266003, Shandong, People's Republic of China.

出版信息

Arch Microbiol. 2023 Feb 2;205(2):79. doi: 10.1007/s00203-023-03408-z.

Abstract

A Gram-staining-positive, heterotrophic, non-spore-forming, non-motile, rod-shaped, strain ZS14-85 belonging to the genus Cryobacterium was isolated from soil in Antarctica. Growth was observed in the presence of 0-2% (w/v) NaCl, at pH 7.0-9.0 (optimum, pH 7.0) and 4-30 ℃ (optimum, 20 ℃). Phylogenetic analysis showed that strain ZS14-85 formed a lineage in the genus Cryobacterium. The digital DNA-DNA hybridization (dDDH) values between strain ZS14-85 and its close relatives Cryobacterium psychrotolerans CGMCC 1.5382, Cryobacterium soli MCCC 1K03549 and Cryobacterium breve NBRC 113800 were 22.5, 22.3 and 22.2%, respectively. Orthologous Average Nucleotide Identity (OrthoANI) scores between strain ZS14-85 and C. psychrotolerans CGMCC 1.5382, C. breve NBRC 113800 and C. soli MCCC 1K03549 were 78.7, 78.1 and 77.7%, respectively. The polar lipids of strain ZS14-85 were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), one unidentified glycolipid (GL) and two unidentified lipids (L). The major fatty acids were anteiso-C (60.7%), iso-C (17.0%) and anteiso-C (15.2%). MK-10, MK-11 and MK-9 were the predominant respiratory menaquinones. Based on phenotypic, phylogenetic and genotypic data, a novel species, Cryobacterium zhongshanensis sp. nov. is proposed. The type strain is ZS14-85 (= CCTCC AB 2019396 = KCTC 49384).

摘要

一株革兰氏阳性、异养、非孢子形成、非运动、杆状的菌株 ZS14-85 从南极洲土壤中分离得到,属于 Cryobacterium 属。该菌在 0-2%(w/v)NaCl、pH7.0-9.0(最佳 pH7.0)和 4-30℃(最佳 20℃)条件下生长。系统发育分析表明,菌株 ZS14-85 在 Cryobacterium 属中形成一个谱系。菌株 ZS14-85 与其近缘种 Cryobacterium psychrotolerans CGMCC 1.5382、Cryobacterium soli MCCC 1K03549 和 Cryobacterium breve NBRC 113800 的数字 DNA-DNA 杂交(dDDH)值分别为 22.5%、22.3%和 22.2%。菌株 ZS14-85 与 C. psychrotolerans CGMCC 1.5382、C. breve NBRC 113800 和 C. soli MCCC 1K03549 的 OrthoANI 得分分别为 78.7%、78.1%和 77.7%。菌株 ZS14-85 的极性脂为双磷脂酰甘油(DPG)、磷脂酰甘油(PG)、一种未鉴定的糖脂(GL)和两种未鉴定的脂(L)。主要脂肪酸为 anteiso-C(60.7%)、iso-C(17.0%)和 anteiso-C(15.2%)。MK-10、MK-11 和 MK-9 是主要的呼吸menaquinones。基于表型、系统发育和基因型数据,提出了一个新种,即Cryobacterium zhongshanensis sp. nov.。模式菌株为 ZS14-85(= CCTCC AB 2019396 = KCTC 49384)。

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