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一种新型裂解性噬菌体vB_PseuP-SA22的分离、鉴定及其对耐碳青霉烯类细菌的作用

Isolation and Characterization of a Novel Lytic Phage, vB_PseuP-SA22, and Its Efficacy against Carbapenem-Resistant .

作者信息

Teklemariam Addisu D, Al-Hindi Rashad R, Alharbi Mona G, Alotibi Ibrahim, Azhari Sheren A, Qadri Ishtiaq, Alamri Turki, Esmael Ahmed, Harakeh Steve

机构信息

Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia.

Health Information Technology Department, Applied College, King Abdulaziz University, Jeddah 21589, Saudi Arabia.

出版信息

Antibiotics (Basel). 2023 Mar 2;12(3):497. doi: 10.3390/antibiotics12030497.

Abstract

Carbapenem-resistant (CRPA) poses a serious public health threat in multiple clinical settings. In this study, we detail the isolation of a lytic bacteriophage, vB_PseuP-SA22, from wastewater using a clinical strain of CRPA. Transmission electron microscopy (TEM) analysis identified that the phage had a podovirus morphology, which agreed with the results of whole genome sequencing. BLASTn search allowed us to classify vB_PseuP-SA22 into the genus . The genome of vB_PseuP-SA22 consisted of 45,458 bp of double-stranded DNA, with a GC content of 52.5%. Of all the open reading frames (ORFs), only 26 (44.8%) were predicted to encode certain functional proteins, whereas the remaining 32 (55.2%) ORFs were annotated as sequences coding functionally uncharacterized hypothetical proteins. The genome lacked genes coding for toxins or markers of lysogenic phages, including integrases, repressors, recombinases, or excisionases. The phage produced round, halo plaques with a diameter of 1.5 ± 2.5 mm on the bacterial lawn. The TEM revealed that vB_PseuP-SA22 has an icosahedral head of 57.5 ± 4.5 nm in length and a short, non-contractile tail (19.5 ± 1.4 nm). The phage showed a latent period of 30 min, a burst size of 300 PFU/infected cells, and a broad host range. vB_PseuP-SA22 was found to be stable between 4-60 °C for 1 h, while the viability of the virus was reduced at temperatures above 60 °C. The phage showed stability at pH levels between 5 and 11. vB_PauP-SA22 reduced the number of live bacteria in . biofilm by almost five logs. The overall results indicated that the isolated phage could be a candidate to control CRPA infections. However, experimental in vivo studies are essential to ensure the safety and efficacy of vB_PauP-SA22 before its use in humans.

摘要

耐碳青霉烯类(CRPA)在多种临床环境中对公众健康构成严重威胁。在本研究中,我们详细描述了使用一株临床CRPA菌株从废水中分离出一种裂解性噬菌体vB_PseuP - SA22的过程。透射电子显微镜(TEM)分析确定该噬菌体具有肌尾噬菌体形态,这与全基因组测序结果一致。通过BLASTn搜索,我们将vB_PseuP - SA22归类到 属。vB_PseuP - SA22的基因组由45458 bp的双链DNA组成,GC含量为52.5%。在所有开放阅读框(ORF)中,只有26个(44.8%)被预测编码某些功能蛋白,而其余32个(55.2%)ORF被注释为编码功能未表征的假设蛋白的序列。该基因组缺乏编码毒素或溶原性噬菌体标记物的基因,包括整合酶、阻遏物、重组酶或切除酶。该噬菌体在细菌菌苔上产生直径为1.5±2.5 mm的圆形晕斑。TEM显示vB_PseuP - SA22有一个长度为57.5±4.5 nm的二十面体头部和一条短的、非收缩性的尾部(19.5±1.4 nm)。该噬菌体的潜伏期为30分钟,裂解量为300 PFU/感染细胞,且宿主范围广泛。发现vB_PseuP - SA22在4 - 60°C之间1小时内稳定,而在60°C以上温度时病毒活力降低。该噬菌体在pH值5至11之间表现出稳定性。vB_PauP - SA22使 生物膜中的活菌数量减少了近五个对数级。总体结果表明,分离出的噬菌体可能是控制CRPA感染的候选物。然而,在将vB_PauP - SA22用于人类之前,进行体内实验研究对于确保其安全性和有效性至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d9c8/10044225/5a2d0dc03b9c/antibiotics-12-00497-g001.jpg

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