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生物学中的电子隧穿:何时重要?

Electron Tunneling in Biology: When Does it Matter?

作者信息

Mostajabi Sarhangi Setare, Matyushov Dmitry V

机构信息

School of Molecular Sciences and Department of Physics, Arizona State University, PO Box 871504, Tempe, Arizona 85287-1504, United States.

出版信息

ACS Omega. 2023 Jul 20;8(30):27355-27365. doi: 10.1021/acsomega.3c02719. eCollection 2023 Aug 1.

Abstract

Electrons can tunnel between cofactor molecules positioned along biological electron transport chains up to a distance of ≃ 20 Å on the millisecond time scale of enzymatic turnover. This tunneling range determines the design of biological energy chains facilitating the cross-membrane transport of electrons. Tunneling distance and cofactors' redox potentials become the main physical parameters affecting the rate of electron transport. In addition, universal charge-transport properties are assigned to all proteins, making protein identity, flexibility, and dynamics insignificant. This paradigm is challenged by dynamical models of electron transfer, showing that the electron hopping rate is constant within the crossover distance * ≃ 12 Å, followed with an exponential falloff at longer distances. If this hypothesis is fully confirmed, natural and man-made energy chains for electron transport should be best designed by placing redox cofactors near the crossover distance *. Protein flexibility and dynamics affect the magnitude of the maximum hopping rate within the crossover distance. Changes in protein flexibility between forward and backward transitions contribute to vectorial charge transport. For biological energy chains, charge transport through proteins is not defined by universal parameters, and protein identity matters.

摘要

在酶促周转的毫秒时间尺度上,电子能够在沿着生物电子传递链排列的辅因子分子之间隧穿,隧穿距离可达约20 Å。这一隧穿范围决定了促进电子跨膜传输的生物能量链的设计。隧穿距离和辅因子的氧化还原电位成为影响电子传输速率的主要物理参数。此外,所有蛋白质都具有普遍的电荷传输特性,使得蛋白质的特性、柔韧性和动力学变得无关紧要。这种范式受到电子转移动力学模型的挑战,该模型表明,在交叉距离约为12 Å内,电子跳跃速率是恒定的,而在更长距离时则呈指数下降。如果这一假设得到充分证实,那么用于电子传输的天然和人造能量链最好通过将氧化还原辅因子放置在交叉距离附近来进行设计。蛋白质的柔韧性和动力学影响交叉距离内最大跳跃速率的大小。向前和向后转变之间蛋白质柔韧性的变化有助于矢量电荷传输。对于生物能量链来说,通过蛋白质的电荷传输并非由通用参数决定,蛋白质的特性很重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/967c/10399179/d7468df1f64b/ao3c02719_0001.jpg

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