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使用具有特征对齐功能的 EFA-Net 自动高效地从 CT 图像中分割气胸。

Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function.

机构信息

School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China.

Shanghai University of Medicine and Health Sciences, Shanghai, 200237, China.

出版信息

Sci Rep. 2023 Sep 15;13(1):15291. doi: 10.1038/s41598-023-42388-4.

DOI:10.1038/s41598-023-42388-4
PMID:37714871
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10504271/
Abstract

Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to balance model complexity with performance. To address this, we introduce the Efficient Feature Alignment Network (EFA-Net), a novel medical image segmentation network designed specifically for pneumothorax CT segmentation. EFA-Net uses EfficientNet as an encoder to extract features and a Feature Alignment (FA) module as a decoder to align features in both the spatial and channel dimensions. This design allows EFA-Net to achieve superior segmentation performance with reduced model complexity. In our dataset, our method outperforms various state-of-the-art methods in terms of accuracy and efficiency, achieving a Dice coefficient of 90.03%, an Intersection over Union (IOU) of 81.80%, and a sensitivity of 88.94%. Notably, EFA-Net has significantly lower FLOPs (1.549G) and parameters (0.432M), offering better robustness and facilitating easier deployment. Future work will explore the integration of downstream applications to enhance EFA-Net's utility for clinicians and patients in real-world diagnostic scenarios. The source code of EFA-Net is available at: https://github.com/tianjiamutangchun/EFA-Net .

摘要

气胸是一种涉及肺部塌陷的病症,需要对计算机断层扫描 (CT) 图像进行准确的分割,以做出有效的临床决策。已经提出了许多基于卷积神经网络的医学图像分割方法,但它们往往难以在模型复杂性和性能之间取得平衡。为了解决这个问题,我们引入了高效特征对齐网络 (EFA-Net),这是一种专门为气胸 CT 分割设计的新型医学图像分割网络。EFA-Net 使用 EfficientNet 作为编码器来提取特征,使用特征对齐 (FA) 模块作为解码器来对齐空间和通道维度的特征。这种设计使 EFA-Net 能够在降低模型复杂度的同时实现卓越的分割性能。在我们的数据集上,我们的方法在准确性和效率方面优于各种最先进的方法,达到了 90.03%的 Dice 系数、81.80%的交并比 (IOU) 和 88.94%的敏感度。值得注意的是,EFA-Net 的 FLOPs(1.549G)和参数(0.432M)明显更低,具有更好的鲁棒性,更便于部署。未来的工作将探索集成下游应用程序,以增强 EFA-Net 在实际诊断场景中为临床医生和患者提供的实用性。EFA-Net 的源代码可在:https://github.com/tianjiamutangchun/EFA-Net。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/e656c7bb8da6/41598_2023_42388_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/96a5dce32af0/41598_2023_42388_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/e656c7bb8da6/41598_2023_42388_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/96a5dce32af0/41598_2023_42388_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/62d2550ce15f/41598_2023_42388_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/18c2a79e7cb3/41598_2023_42388_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/9f1c2597ccec/41598_2023_42388_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a80/10504271/e656c7bb8da6/41598_2023_42388_Fig5_HTML.jpg

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