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鼠伤寒沙门氏菌孤儿噬菌体 Arash 的分离与分子特征分析。

Isolation and molecular characterization of the Salmonella Typhimurium orphan phage Arash.

机构信息

Department of Food Hygiene and Public Health, School of Veterinary Medicine, Shiraz University, Shiraz, 71946- 84471, Iran.

Department of Biosystems, KU Leuven, Leuven, 3001, Belgium.

出版信息

BMC Microbiol. 2023 Oct 19;23(1):297. doi: 10.1186/s12866-023-03056-9.

DOI:10.1186/s12866-023-03056-9
PMID:37858092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10585845/
Abstract

The current threat of multidrug resistant strains necessitates development of alternatives to antibiotics such as bacteriophages. This study describes the isolation and characterization of a novel Salmonella Typhimurium phage 'Arash' from hospital wastewater in Leuven, Belgium. Arash has a myovirus morphology with a 95 nm capsid and a 140 nm tail. The host range of Arash is restricted to its isolation host. Approximately 86% of the phage particles are adsorbed to a host cell within 10 min. Arash has latent period of 65 min and burst size of 425 PFU/cell. Arash has a dsDNA genome of 180,819 bp with GC content of 53.02% with no similarities to any characterized phages, suggesting Arash as a novel species in the novel 'Arashvirus' genus. Arash carries no apparent lysogeny-, antibiotic resistance- nor virulence-related genes. Proteome analysis revealed 116 proteins as part of the mature phage particles of which 27 could be assigned a function. Therefore, the present findings shed light on the morphological, microbiological and genomic characteristics of Arash and suggest its potential application as therapeutic and/or biocontrol agent.

摘要

当前,多药耐药菌株的威胁需要开发抗生素替代品,例如噬菌体。本研究描述了一种新型肠炎沙门氏菌噬菌体 'Arash' 的分离和特性,该噬菌体是从比利时鲁汶的医院废水中分离得到的。Arash 具有肌尾噬菌体的形态,衣壳直径为 95nm,尾长 140nm。Arash 的宿主范围仅限于其分离宿主。大约 86%的噬菌体颗粒在 10 分钟内被吸附到宿主细胞上。Arash 的潜伏期为 65 分钟,爆发量为 425PFU/细胞。Arash 的 dsDNA 基因组大小为 180819bp,GC 含量为 53.02%,与任何已鉴定的噬菌体均无相似性,表明 Arash 是新型 'Arashvirus' 属中的一个新型物种。Arash 不携带明显的溶原性、抗生素抗性或毒力相关基因。蛋白质组分析显示,成熟噬菌体颗粒中有 116 种蛋白质,其中 27 种可以被赋予功能。因此,本研究结果揭示了 Arash 的形态学、微生物学和基因组特征,并表明其作为治疗剂和/或生物防治剂的潜在应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/7f5a10bf90e6/12866_2023_3056_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/52f689ea05eb/12866_2023_3056_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/49db372d94b0/12866_2023_3056_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/d25b9485f03f/12866_2023_3056_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/7f5a10bf90e6/12866_2023_3056_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/52f689ea05eb/12866_2023_3056_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/49db372d94b0/12866_2023_3056_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/d25b9485f03f/12866_2023_3056_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7132/10585845/7f5a10bf90e6/12866_2023_3056_Fig4_HTML.jpg

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