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注意力就是你需要的一切:在人工智能药物发现中利用注意力机制。

Attention is all you need: utilizing attention in AI-enabled drug discovery.

机构信息

Innovative Institute of Chinese Medicine and Pharmacy, Academy for Interdiscipline, Chengdu University of Traditional Chinese Medicine, Chengdu, China.

Department of Gastrointestinal Medical Oncology, Harbin Medical University Cancer Hospital, No.150 Haping Road, Nangang District, Harbin, Heilongjiang 150081, China.

出版信息

Brief Bioinform. 2023 Nov 22;25(1). doi: 10.1093/bib/bbad467.

Abstract

Recently, attention mechanism and derived models have gained significant traction in drug development due to their outstanding performance and interpretability in handling complex data structures. This review offers an in-depth exploration of the principles underlying attention-based models and their advantages in drug discovery. We further elaborate on their applications in various aspects of drug development, from molecular screening and target binding to property prediction and molecule generation. Finally, we discuss the current challenges faced in the application of attention mechanisms and Artificial Intelligence technologies, including data quality, model interpretability and computational resource constraints, along with future directions for research. Given the accelerating pace of technological advancement, we believe that attention-based models will have an increasingly prominent role in future drug discovery. We anticipate that these models will usher in revolutionary breakthroughs in the pharmaceutical domain, significantly accelerating the pace of drug development.

摘要

最近,由于在处理复杂数据结构方面的出色表现和可解释性,注意力机制和衍生模型在药物开发中引起了广泛关注。本文深入探讨了基于注意力的模型的原理及其在药物发现中的优势。我们进一步阐述了它们在药物开发的各个方面的应用,从分子筛选和靶标结合到性质预测和分子生成。最后,我们讨论了注意力机制和人工智能技术应用中当前面临的挑战,包括数据质量、模型可解释性和计算资源限制,以及未来的研究方向。鉴于技术进步的步伐正在加快,我们相信基于注意力的模型在未来的药物发现中将扮演越来越重要的角色。我们预计,这些模型将在制药领域引发革命性的突破,显著加快药物开发的速度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76dc/10772984/fc01e3e9c736/bbad467f1.jpg

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