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本文引用的文献

1
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
2
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries.高通量 ANI 分析 9 万余组原核基因组揭示了清晰的物种界限。
Nat Commun. 2018 Nov 30;9(1):5114. doi: 10.1038/s41467-018-07641-9.
3
KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase：美国能源部系统生物学知识库。
Nat Biotechnol. 2018 Jul 6;36(7):566-569. doi: 10.1038/nbt.4163.
4
Minimap2: pairwise alignment for nucleotide sequences.Minimap2：核苷酸序列的两两比对。
Bioinformatics. 2018 Sep 15;34(18):3094-3100. doi: 10.1093/bioinformatics/bty191.
5
Long-term pattern and magnitude of soil carbon feedback to the climate system in a warming world.在变暖的世界中，土壤碳向气候系统反馈的长期模式和幅度。
Science. 2017 Oct 6;358(6359):101-105. doi: 10.1126/science.aan2874.
6
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.细菌和古菌单扩增基因组（MISAG）及宏基因组组装基因组（MIMAG）的最低信息要求
Nat Biotechnol. 2017 Aug 8;35(8):725-731. doi: 10.1038/nbt.3893.
7
Fast and accurate de novo genome assembly from long uncorrected reads.从长的未校正读段中进行快速且准确的从头基因组组装。
Genome Res. 2017 May;27(5):737-746. doi: 10.1101/gr.214270.116. Epub 2017 Jan 18.
8
Current knowledge and perspectives of Paenibacillus: a review.芽孢杆菌属的当前知识与展望：综述
Microb Cell Fact. 2016 Dec 1;15(1):203. doi: 10.1186/s12934-016-0603-7.
9
Insight into metabolic pathways of the potential biofuel producer, Paenibacillus polymyxa ICGEB2008.深入了解潜在生物燃料生产者多粘芽孢杆菌ICGEB2008的代谢途径。
Biotechnol Biofuels. 2015 Sep 25;8:159. doi: 10.1186/s13068-015-0338-4. eCollection 2015.
10
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.

用于生物燃料生产的候选菌株RC80的高质量基因组草图序列。

High-quality draft genome sequence of sp. RC80, a candidate for biofuel production.

作者信息

Rizzo Gabriella, Choudoir Mallory, Simoes Rachel, Dayarathne Nipuni, DeAngelis Kristen M

机构信息

Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.

Department of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina, USA.

出版信息

Microbiol Resour Announc. 2024 Jul 18;13(7):e0106723. doi: 10.1128/mra.01067-23. Epub 2024 Jun 7.

DOI:10.1128/mra.01067-23
PMID:38847544
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11256801/
Abstract

sp. RC80 was isolated from temperate deciduous forest soil in New England. The assembled genome is a single contig with 5,977,337 bp and 97.15% estimated completion. RC80 contains features for 2,3-butanediol dehydrogenase production and pathways involved in ethanol production.

摘要

菌株RC80是从新英格兰的温带落叶林土壤中分离出来的。组装后的基因组是一个单一的重叠群，长度为5,977,337 bp，估计完成度为97.15%。RC80具有产生2,3-丁二醇脱氢酶的特征以及参与乙醇生产的途径。