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利用分子对接方法揭示印楝对食源细菌生物膜形成的影响及潜在机制

Unveiling the Neem () Effects on Biofilm Formation of Food-Borne Bacteria and the Potential Mechanism Using a Molecular Docking Approach.

作者信息

Mahmoud Ghada Abd-Elmonsef, Rashed Nahed M, El-Ganainy Sherif M, Salem Shimaa H

机构信息

Botany and Microbiology Department, Faculty of Science, Assiut University, Assiut 71516, Egypt.

Department of Arid Land Agriculture, College of Agricultural and Food Sciences, King Faisal University, P.O. Box 420, Al-Ahsa 31982, Saudi Arabia.

出版信息

Plants (Basel). 2024 Sep 23;13(18):2669. doi: 10.3390/plants13182669.

Abstract

Biofilms currently represent the most prevalent bacterial lifestyle, enabling them to resist environmental stress and antibacterial drugs. Natural antibacterial agents could be a safe solution for controlling bacterial biofilms in food industries without affecting human health and environmental safety. A methanolic extract of (neem) leaves was prepared and analyzed using gas chromatography-mass spectrometry for the identification of its phytochemical constituents. Four food-borne bacterial pathogens (, , , and ) were tested for biofilm formation qualitatively and quantitatively. The antibacterial and antibiofilm properties of the extract were estimated using liquid cultures and a microtiter plate assay. The biofilm inhibition mechanisms were investigated using a light microscope and molecular docking technique. The methanolic extract contained 45 identified compounds, including fatty acids, ester, phenols, flavonoids, terpenes, steroids, and antioxidants with antimicrobial, anticancer, and anti-inflammatory properties. Substantial antibacterial activity in relation to the extract was recorded, especially at 100 μg/mL against and . The extract inhibited biofilm formation at 100 μg/mL by 83.83% (), 73.12% (), and 54.4% (). The results indicate efficient biofilm formation by the Gram-negative bacteria , , and , giving 0.74, 0.292, and 0.219 OD at 595 nm, respectively, while was found to have a low biofilm formation potential, i.e., 0.14 OD at 595 nm. The light microscope technique shows the antibiofilm activities with the biofilm almost disappearing at 75 μg/mL and 100 μg/mL concentrations. This antibiofilm property was attributed to DNA gyrase inhibition as illustrated by the molecular docking approach.

摘要

生物膜目前是最普遍的细菌生存方式,使细菌能够抵抗环境压力和抗菌药物。天然抗菌剂可能是一种安全的解决方案,可用于控制食品工业中的细菌生物膜,而不影响人类健康和环境安全。制备了印楝叶的甲醇提取物,并使用气相色谱 - 质谱法对其植物化学成分进行分析。对四种食源性病原体([具体病原体名称未给出])进行了生物膜形成的定性和定量测试。使用液体培养和微量滴定板分析法评估提取物的抗菌和抗生物膜特性。使用光学显微镜和分子对接技术研究生物膜抑制机制。甲醇提取物含有45种已鉴定的化合物,包括脂肪酸、酯、酚类、黄酮类、萜类化合物、类固醇以及具有抗菌、抗癌和抗炎特性的抗氧化剂。记录到提取物具有显著的抗菌活性,尤其是在100μg/mL时对[具体细菌名称未给出]和[具体细菌名称未给出]。提取物在100μg/mL时对生物膜形成的抑制率分别为83.83%([具体细菌名称未给出])、73.12%([具体细菌名称未给出])和54.4%([具体细菌名称未给出])。结果表明革兰氏阴性菌[具体细菌名称未给出]、[具体细菌名称未给出]和[具体细菌名称未给出]能有效形成生物膜,在595nm处的吸光度分别为0.74、0.292和0.219,而[具体细菌名称未给出]的生物膜形成潜力较低,即在595nm处为0.14OD。光学显微镜技术显示了抗生物膜活性,在75μg/mL和100μg/mL浓度下生物膜几乎消失。分子对接方法表明,这种抗生物膜特性归因于对DNA促旋酶的抑制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e3/11434743/42265b86995e/plants-13-02669-g001.jpg

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