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来自全球不同环境的28株新型菌株的生物技术和制药潜力。

Biotechnological and pharmaceutical potential of twenty-eight novel type strains of from different environments worldwide.

作者信息

Nouioui Imen, Boldt Judith, Zimmermann Alina, Makitrynskyy Roman, Pötter Gabriele, Jando Marlen, Döppner Meike, Kirstein Sarah, Neumann-Schaal Meina, Gomez-Escribano Juan Pablo, Nübel Ulrich, Mast Yvonne

机构信息

Leibniz-Institut DSMZ - German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.

German Center for Infection Research (DZIF), Braunschweig, Germany.

出版信息

Curr Res Microb Sci. 2024 Oct 11;7:100290. doi: 10.1016/j.crmicr.2024.100290. eCollection 2024.

Abstract

Actinomycetes are a prolific source of bioactive natural compounds many of which are used as antibiotics or other drugs. In this study we investigated the genomic and biochemical diversity of 32 actinobacterial strains that had been deposited at the DSMZ-German Collection of Microorganisms and Cell Cultures decades ago. Genome-based phylogeny and DNA-DNA hybridization supported the assignment of these strains to 26 novel species and two novel subspecies and a reclassification of a species. These results were consistent with the biochemical, enzymatic, and chemotaxonomic features of the strains. Most of the strains showed antimicrobial activities against a range of Gram-positive and Gram-negative bacteria, and against yeast. Genomic analysis revealed the presence of numerous unique biosynthetic gene clusters (BGCs) encoding for potential novel antibiotic and anti-cancer compounds. Strains DSM 41636 and DSM 61640 produced the antibiotic compounds A33853 and SF2768, respectively. Overall, this reflects the significant pharmaceutical and biotechnological potential of the proposed novel type strains and underlines the role of prokaryotic systematics for drug discovery. In order to compensate for the gender gap in naming prokaryotic species, we propose the eponyms for all newly described species to honour female scientists.

摘要

放线菌是生物活性天然化合物的丰富来源,其中许多被用作抗生素或其他药物。在本研究中,我们调查了32株放线菌菌株的基因组和生化多样性,这些菌株几十年前就保藏于德国微生物和细胞培养物保藏中心(DSMZ)。基于基因组的系统发育分析和DNA-DNA杂交支持将这些菌株归为26个新物种和2个新亚种,并对一个物种进行了重新分类。这些结果与菌株的生化、酶学和化学分类学特征一致。大多数菌株对一系列革兰氏阳性菌、革兰氏阴性菌和酵母具有抗菌活性。基因组分析显示存在许多独特的生物合成基因簇(BGCs),这些基因簇编码潜在的新型抗生素和抗癌化合物。菌株DSM 41636和DSM 61640分别产生了抗生素化合物A33853和SF2768。总体而言,这反映了所提出的新型模式菌株具有巨大的制药和生物技术潜力,并强调了原核生物分类学在药物发现中的作用。为了弥补原核生物物种命名中的性别差距,我们提议用所有新描述物种的名字来纪念女性科学家。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf2/11533595/3bc79b1809ac/ga1.jpg

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